Protein–RNA interactions for Protein: P28749

RBL1, Retinoblastoma-like protein 1, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBL1P28749 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.32■□□□□ 0.68
RBL1P28749 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RBL1P28749 GCSHP5-201ENST00000443090 522 ntBASIC19.32■□□□□ 0.68
RBL1P28749 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.32■□□□□ 0.68
RBL1P28749 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RBL1P28749 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.32■□□□□ 0.68
RBL1P28749 CD177P1-201ENST00000606252 935 ntBASIC19.32■□□□□ 0.68
RBL1P28749 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.32■□□□□ 0.68
RBL1P28749 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
RBL1P28749 KRT8P32-201ENST00000512863 1461 ntBASIC19.32■□□□□ 0.68
RBL1P28749 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RBL1P28749 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
RBL1P28749 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RBL1P28749 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RBL1P28749 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
RBL1P28749 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.31■□□□□ 0.68
RBL1P28749 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.31■□□□□ 0.68
RBL1P28749 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
RBL1P28749 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.31■□□□□ 0.68
RBL1P28749 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RBL1P28749 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
RBL1P28749 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.31■□□□□ 0.68
RBL1P28749 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.31■□□□□ 0.68
RBL1P28749 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.31■□□□□ 0.68
RBL1P28749 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.31■□□□□ 0.68
RBL1P28749 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.31■□□□□ 0.68
RBL1P28749 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 AL135905.2-201ENST00000584934 1404 ntBASIC19.31■□□□□ 0.68
RBL1P28749 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
RBL1P28749 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RBL1P28749 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
RBL1P28749 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.31■□□□□ 0.68
RBL1P28749 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBL1P28749 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RBL1P28749 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.3■□□□□ 0.68
RBL1P28749 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.3■□□□□ 0.68
RBL1P28749 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.3■□□□□ 0.68
RBL1P28749 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RBL1P28749 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RBL1P28749 FSCN1P1-201ENST00000568912 1481 ntBASIC19.3■□□□□ 0.68
RBL1P28749 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.3■□□□□ 0.68
RBL1P28749 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.3■□□□□ 0.68
RBL1P28749 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.3■□□□□ 0.68
RBL1P28749 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.3■□□□□ 0.68
RBL1P28749 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.3■□□□□ 0.68
RBL1P28749 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RBL1P28749 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RBL1P28749 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RBL1P28749 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.3■□□□□ 0.68
RBL1P28749 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.3■□□□□ 0.68
RBL1P28749 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RBL1P28749 AC126763.1-201ENST00000552015 2118 ntBASIC19.3■□□□□ 0.68
RBL1P28749 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RBL1P28749 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RBL1P28749 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.3■□□□□ 0.68
RBL1P28749 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBL1P28749 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.29■□□□□ 0.68
RBL1P28749 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RBL1P28749 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBL1P28749 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RBL1P28749 AL499627.1-201ENST00000569373 2188 ntBASIC19.29■□□□□ 0.68
RBL1P28749 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBL1P28749 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBL1P28749 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RBL1P28749 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.29■□□□□ 0.68
RBL1P28749 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RBL1P28749 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBL1P28749 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.29■□□□□ 0.68
RBL1P28749 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.29■□□□□ 0.68
RBL1P28749 UBE2SP1-201ENST00000450587 669 ntBASIC19.29■□□□□ 0.68
RBL1P28749 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RBL1P28749 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.29■□□□□ 0.68
RBL1P28749 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.29■□□□□ 0.68
RBL1P28749 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RBL1P28749 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.29■□□□□ 0.68
RBL1P28749 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.29■□□□□ 0.68
RBL1P28749 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RBL1P28749 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBL1P28749 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.29■□□□□ 0.68
RBL1P28749 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBL1P28749 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBL1P28749 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.29■□□□□ 0.68
RBL1P28749 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RBL1P28749 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBL1P28749 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RBL1P28749 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBL1P28749 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.29■□□□□ 0.68
RBL1P28749 AC007613.1-201ENST00000572811 2597 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms