Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CCL1P22362 AL357033.4-201ENST00000617703 1807 ntBASIC16.22■□□□□ 0.19
CCL1P22362 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL1P22362 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL1P22362 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL1P22362 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL1P22362 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL1P22362 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL1P22362 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL1P22362 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCL1P22362 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.22■□□□□ 0.19
CCL1P22362 AC130371.2-201ENST00000619443 611 ntBASIC16.22■□□□□ 0.19
CCL1P22362 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.22■□□□□ 0.19
CCL1P22362 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL1P22362 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.22■□□□□ 0.19
CCL1P22362 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CCL1P22362 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCL1P22362 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.22■□□□□ 0.19
CCL1P22362 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.22■□□□□ 0.19
CCL1P22362 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCL1P22362 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CCL1P22362 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CCL1P22362 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL1P22362 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCL1P22362 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL1P22362 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL1P22362 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL1P22362 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.21■□□□□ 0.19
CCL1P22362 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL1P22362 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL1P22362 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL1P22362 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL1P22362 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL1P22362 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL1P22362 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL1P22362 AC008040.2-201ENST00000461049 708 ntBASIC16.21■□□□□ 0.19
CCL1P22362 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CCL1P22362 C1QBPP2-201ENST00000528754 825 ntBASIC16.21■□□□□ 0.19
CCL1P22362 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCL1P22362 AF186192.3-201ENST00000583427 947 ntBASIC16.21■□□□□ 0.19
CCL1P22362 AC073195.1-201ENST00000607241 877 ntBASIC16.21■□□□□ 0.19
CCL1P22362 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL1P22362 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL1P22362 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCL1P22362 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCL1P22362 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL1P22362 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL1P22362 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL1P22362 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CCL1P22362 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL1P22362 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL1P22362 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CCL1P22362 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.2■□□□□ 0.18
CCL1P22362 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL1P22362 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL1P22362 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
CCL1P22362 RPPH1-201ENST00000516869 333 ntBASIC16.2■□□□□ 0.18
CCL1P22362 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCL1P22362 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL1P22362 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL1P22362 CR392000.1-201ENST00000624770 1228 ntBASIC16.2■□□□□ 0.18
CCL1P22362 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CCL1P22362 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL1P22362 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.19■□□□□ 0.18
CCL1P22362 RCC2P3-201ENST00000418112 1537 ntBASIC16.19■□□□□ 0.18
CCL1P22362 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.19■□□□□ 0.18
CCL1P22362 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CCL1P22362 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCL1P22362 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCL1P22362 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.19■□□□□ 0.18
CCL1P22362 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CCL1P22362 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 FAM207BP-201ENST00000447172 505 ntBASIC16.19■□□□□ 0.18
CCL1P22362 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.19■□□□□ 0.18
CCL1P22362 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.19■□□□□ 0.18
CCL1P22362 KRT18P41-201ENST00000518924 1277 ntBASIC16.19■□□□□ 0.18
CCL1P22362 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.19■□□□□ 0.18
CCL1P22362 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL1P22362 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.19■□□□□ 0.18
CCL1P22362 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms