Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.66■□□□□ 0.9
ITGA4P13612 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ITGA4P13612 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.65■□□□□ 0.9
ITGA4P13612 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA4P13612 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA4P13612 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.65■□□□□ 0.9
ITGA4P13612 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.65■□□□□ 0.9
ITGA4P13612 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.65■□□□□ 0.9
ITGA4P13612 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA4P13612 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.65■□□□□ 0.9
ITGA4P13612 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA4P13612 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.65■□□□□ 0.9
ITGA4P13612 FAM8A6P-201ENST00000407496 1135 ntBASIC20.65■□□□□ 0.9
ITGA4P13612 AC092647.4-201ENST00000457211 535 ntBASIC20.65■□□□□ 0.9
ITGA4P13612 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.65■□□□□ 0.9
ITGA4P13612 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.65■□□□□ 0.9
ITGA4P13612 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA4P13612 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.65■□□□□ 0.9
ITGA4P13612 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA4P13612 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ITGA4P13612 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.65■□□□□ 0.9
ITGA4P13612 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA4P13612 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA4P13612 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGA4P13612 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ITGA4P13612 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ITGA4P13612 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
ITGA4P13612 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ITGA4P13612 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ITGA4P13612 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.64■□□□□ 0.89
ITGA4P13612 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.64■□□□□ 0.89
ITGA4P13612 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
ITGA4P13612 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.64■□□□□ 0.89
ITGA4P13612 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ITGA4P13612 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ITGA4P13612 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ITGA4P13612 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.64■□□□□ 0.89
ITGA4P13612 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
ITGA4P13612 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.64■□□□□ 0.89
ITGA4P13612 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ITGA4P13612 AL023973.1-201ENST00000624619 620 ntBASIC20.64■□□□□ 0.89
ITGA4P13612 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ITGA4P13612 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.64■□□□□ 0.89
ITGA4P13612 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ITGA4P13612 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ITGA4P13612 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ITGA4P13612 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.64■□□□□ 0.89
ITGA4P13612 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ITGA4P13612 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.64■□□□□ 0.89
ITGA4P13612 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.63■□□□□ 0.89
ITGA4P13612 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.63■□□□□ 0.89
ITGA4P13612 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.63■□□□□ 0.89
ITGA4P13612 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.63■□□□□ 0.89
ITGA4P13612 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
ITGA4P13612 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.63■□□□□ 0.89
ITGA4P13612 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.63■□□□□ 0.89
ITGA4P13612 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.63■□□□□ 0.89
ITGA4P13612 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.63■□□□□ 0.89
ITGA4P13612 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.63■□□□□ 0.89
ITGA4P13612 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ITGA4P13612 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ITGA4P13612 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.62■□□□□ 0.89
ITGA4P13612 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ITGA4P13612 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.62■□□□□ 0.89
ITGA4P13612 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ITGA4P13612 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA4P13612 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA4P13612 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA4P13612 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA4P13612 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA4P13612 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA4P13612 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.62■□□□□ 0.89
ITGA4P13612 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA4P13612 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
ITGA4P13612 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ITGA4P13612 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ITGA4P13612 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ITGA4P13612 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ITGA4P13612 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.61■□□□□ 0.89
ITGA4P13612 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms