Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC172P0C7W6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 WIZP1-201ENST00000531444 2299 ntBASIC20.34■□□□□ 0.85
CCDC172P0C7W6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 Z85996.1-201ENST00000494644 937 ntBASIC20.34■□□□□ 0.85
CCDC172P0C7W6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC172P0C7W6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 NIFKP9-201ENST00000419265 221 ntBASIC20.33■□□□□ 0.85
CCDC172P0C7W6 AL353807.1-201ENST00000427475 662 ntBASIC20.33■□□□□ 0.85
CCDC172P0C7W6 AP002982.1-201ENST00000492365 877 ntBASIC20.33■□□□□ 0.85
CCDC172P0C7W6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 PRSS44-201ENST00000515154 1146 ntBASIC20.33■□□□□ 0.85
CCDC172P0C7W6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 AL353708.3-201ENST00000610272 989 ntBASIC20.33■□□□□ 0.85
CCDC172P0C7W6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC172P0C7W6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC172P0C7W6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC172P0C7W6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC172P0C7W6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC172P0C7W6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC172P0C7W6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC172P0C7W6 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC172P0C7W6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC172P0C7W6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC172P0C7W6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC172P0C7W6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 AC079598.2-202ENST00000546624 1451 ntBASIC20.32■□□□□ 0.84
CCDC172P0C7W6 AC090164.3-201ENST00000610780 2143 ntBASIC20.32■□□□□ 0.84
CCDC172P0C7W6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC172P0C7W6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms