Protein–RNA interactions for Protein: P04433

IGKV3-11, Immunoglobulin kappa variable 3-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-11P04433 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 AL357033.4-201ENST00000617703 1807 ntBASIC17.37■□□□□ 0.37
IGKV3-11P04433 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 AC093525.10-201ENST00000625130 1569 ntBASIC17.37■□□□□ 0.37
IGKV3-11P04433 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IGKV3-11P04433 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.37■□□□□ 0.37
IGKV3-11P04433 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.36■□□□□ 0.37
IGKV3-11P04433 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 TMPOP1-202ENST00000424642 1267 ntBASIC17.36■□□□□ 0.37
IGKV3-11P04433 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 KRT18P21-201ENST00000515767 1272 ntBASIC17.36■□□□□ 0.37
IGKV3-11P04433 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 AC006011.2-201ENST00000621313 1158 ntBASIC17.36■□□□□ 0.37
IGKV3-11P04433 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
IGKV3-11P04433 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IGKV3-11P04433 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
IGKV3-11P04433 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.35■□□□□ 0.37
IGKV3-11P04433 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
IGKV3-11P04433 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 AC098818.2-201ENST00000564925 2320 ntBASIC17.35■□□□□ 0.37
IGKV3-11P04433 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
IGKV3-11P04433 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.35■□□□□ 0.37
IGKV3-11P04433 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.35■□□□□ 0.37
IGKV3-11P04433 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.35■□□□□ 0.37
IGKV3-11P04433 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.35■□□□□ 0.37
IGKV3-11P04433 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.35■□□□□ 0.37
IGKV3-11P04433 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IGKV3-11P04433 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 Z98044.1-201ENST00000632503 1764 ntBASIC17.35■□□□□ 0.37
IGKV3-11P04433 CROCCP3-202ENST00000420820 1947 ntBASIC17.35■□□□□ 0.37
IGKV3-11P04433 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IGKV3-11P04433 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.35■□□□□ 0.37
IGKV3-11P04433 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IGKV3-11P04433 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.35■□□□□ 0.37
IGKV3-11P04433 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.34■□□□□ 0.37
IGKV3-11P04433 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IGKV3-11P04433 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms