Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.28■□□□□ 0.68
TOP3BO95985 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.28■□□□□ 0.68
TOP3BO95985 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOP3BO95985 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.27■□□□□ 0.68
TOP3BO95985 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP3BO95985 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TOP3BO95985 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP3BO95985 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP3BO95985 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TOP3BO95985 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.27■□□□□ 0.68
TOP3BO95985 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.27■□□□□ 0.68
TOP3BO95985 AL450487.1-201ENST00000426799 995 ntBASIC19.27■□□□□ 0.68
TOP3BO95985 AC117947.1-201ENST00000427448 529 ntBASIC19.27■□□□□ 0.68
TOP3BO95985 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TOP3BO95985 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.27■□□□□ 0.68
TOP3BO95985 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP3BO95985 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP3BO95985 ZNF815P-204ENST00000434898 1737 ntBASIC19.27■□□□□ 0.68
TOP3BO95985 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP3BO95985 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP3BO95985 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP3BO95985 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOP3BO95985 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TOP3BO95985 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.27■□□□□ 0.67
TOP3BO95985 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TOP3BO95985 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TOP3BO95985 SDHAP1-207ENST00000440850 2000 ntBASIC19.27■□□□□ 0.67
TOP3BO95985 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.27■□□□□ 0.67
TOP3BO95985 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TOP3BO95985 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.26■□□□□ 0.67
TOP3BO95985 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 FP475955.4-201ENST00000623131 1990 ntBASIC19.26■□□□□ 0.67
TOP3BO95985 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
TOP3BO95985 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
TOP3BO95985 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.26■□□□□ 0.67
TOP3BO95985 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.26■□□□□ 0.67
TOP3BO95985 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.26■□□□□ 0.67
TOP3BO95985 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TOP3BO95985 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.26■□□□□ 0.67
TOP3BO95985 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.26■□□□□ 0.67
TOP3BO95985 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.26■□□□□ 0.67
TOP3BO95985 AC004264.1-201ENST00000608354 794 ntBASIC19.26■□□□□ 0.67
TOP3BO95985 AC093458.2-201ENST00000623150 629 ntBASIC19.26■□□□□ 0.67
TOP3BO95985 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TOP3BO95985 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TOP3BO95985 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.26■□□□□ 0.67
TOP3BO95985 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.26■□□□□ 0.67
TOP3BO95985 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TOP3BO95985 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TOP3BO95985 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TOP3BO95985 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP3BO95985 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP3BO95985 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP3BO95985 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP3BO95985 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TOP3BO95985 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.25■□□□□ 0.67
TOP3BO95985 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP3BO95985 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.25■□□□□ 0.67
TOP3BO95985 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TOP3BO95985 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP3BO95985 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP3BO95985 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP3BO95985 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.25■□□□□ 0.67
TOP3BO95985 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP3BO95985 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TOP3BO95985 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
TOP3BO95985 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.25■□□□□ 0.67
TOP3BO95985 BX664615.1-201ENST00000443558 458 ntBASIC19.25■□□□□ 0.67
TOP3BO95985 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.25■□□□□ 0.67
TOP3BO95985 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.25■□□□□ 0.67
TOP3BO95985 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.25■□□□□ 0.67
TOP3BO95985 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.25■□□□□ 0.67
TOP3BO95985 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.25■□□□□ 0.67
TOP3BO95985 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TOP3BO95985 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TOP3BO95985 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TOP3BO95985 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TOP3BO95985 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TOP3BO95985 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms