Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.22■□□□□ 0.51
CLDN9O95484 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN9O95484 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN9O95484 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN9O95484 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN9O95484 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN9O95484 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLDN9O95484 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN9O95484 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN9O95484 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN9O95484 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CLDN9O95484 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
CLDN9O95484 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN9O95484 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN9O95484 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN9O95484 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN9O95484 AC008040.2-201ENST00000461049 708 ntBASIC18.21■□□□□ 0.51
CLDN9O95484 B3GAT3P1-201ENST00000471720 806 ntBASIC18.21■□□□□ 0.51
CLDN9O95484 AC011506.1-201ENST00000474329 610 ntBASIC18.21■□□□□ 0.51
CLDN9O95484 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.21■□□□□ 0.51
CLDN9O95484 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.21■□□□□ 0.51
CLDN9O95484 AC142381.4-202ENST00000563973 229 ntBASIC18.21■□□□□ 0.51
CLDN9O95484 CKBP1-201ENST00000565489 1086 ntBASIC18.21■□□□□ 0.51
CLDN9O95484 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 AC068587.9-201ENST00000641814 219 ntBASIC18.21■□□□□ 0.51
CLDN9O95484 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN9O95484 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN9O95484 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN9O95484 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
CLDN9O95484 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN9O95484 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN9O95484 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.21■□□□□ 0.5
CLDN9O95484 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
CLDN9O95484 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.21■□□□□ 0.5
CLDN9O95484 KRT8P32-201ENST00000512863 1461 ntBASIC18.2■□□□□ 0.5
CLDN9O95484 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN9O95484 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN9O95484 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN9O95484 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CLDN9O95484 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN9O95484 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 PRORSD1P-201ENST00000295112 541 ntBASIC18.2■□□□□ 0.5
CLDN9O95484 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN9O95484 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.2■□□□□ 0.5
CLDN9O95484 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN9O95484 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN9O95484 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN9O95484 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN9O95484 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CLDN9O95484 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN9O95484 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN9O95484 FSCN1P1-201ENST00000568912 1481 ntBASIC18.2■□□□□ 0.5
CLDN9O95484 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN9O95484 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN9O95484 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN9O95484 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN9O95484 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.19■□□□□ 0.5
CLDN9O95484 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN9O95484 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CLDN9O95484 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN9O95484 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CLDN9O95484 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CLDN9O95484 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.19■□□□□ 0.5
CLDN9O95484 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN9O95484 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN9O95484 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN9O95484 FAM197Y1-201ENST00000421178 764 ntBASIC18.19■□□□□ 0.5
CLDN9O95484 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN9O95484 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.19■□□□□ 0.5
CLDN9O95484 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN9O95484 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN9O95484 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms