Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.77■□□□□ 0.11
ABCA1O95477 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.76■□□□□ 0.11
ABCA1O95477 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ABCA1O95477 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
ABCA1O95477 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ABCA1O95477 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
ABCA1O95477 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ABCA1O95477 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.76■□□□□ 0.11
ABCA1O95477 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ABCA1O95477 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.76■□□□□ 0.11
ABCA1O95477 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.76■□□□□ 0.11
ABCA1O95477 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
ABCA1O95477 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.76■□□□□ 0.11
ABCA1O95477 AC092597.1-201ENST00000487352 616 ntBASIC15.76■□□□□ 0.11
ABCA1O95477 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.76■□□□□ 0.11
ABCA1O95477 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ABCA1O95477 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
ABCA1O95477 AL121672.3-201ENST00000608644 468 ntBASIC15.76■□□□□ 0.11
ABCA1O95477 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
ABCA1O95477 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
ABCA1O95477 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ABCA1O95477 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ABCA1O95477 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ABCA1O95477 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ABCA1O95477 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ABCA1O95477 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ABCA1O95477 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ABCA1O95477 AC036111.1-201ENST00000533973 1582 ntBASIC15.76■□□□□ 0.11
ABCA1O95477 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
ABCA1O95477 BX119927.1-201ENST00000636596 1552 ntBASIC15.76■□□□□ 0.11
ABCA1O95477 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
ABCA1O95477 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.75■□□□□ 0.11
ABCA1O95477 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.75■□□□□ 0.11
ABCA1O95477 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 KRT17P6-201ENST00000453795 1220 ntBASIC15.75■□□□□ 0.11
ABCA1O95477 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.75■□□□□ 0.11
ABCA1O95477 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.75■□□□□ 0.11
ABCA1O95477 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
ABCA1O95477 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.75■□□□□ 0.11
ABCA1O95477 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.75■□□□□ 0.11
ABCA1O95477 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ABCA1O95477 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ABCA1O95477 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
ABCA1O95477 AL645929.1-201ENST00000420084 975 ntBASIC15.75■□□□□ 0.11
ABCA1O95477 PVRIG2P-201ENST00000435460 978 ntBASIC15.75■□□□□ 0.11
ABCA1O95477 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ABCA1O95477 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ABCA1O95477 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.75■□□□□ 0.11
ABCA1O95477 TCF3P1-201ENST00000423021 1937 ntBASIC15.75■□□□□ 0.11
ABCA1O95477 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ABCA1O95477 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.74■□□□□ 0.11
ABCA1O95477 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ABCA1O95477 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ABCA1O95477 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ABCA1O95477 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ABCA1O95477 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
ABCA1O95477 HLA-F-220ENST00000434407 884 ntBASIC15.74■□□□□ 0.11
ABCA1O95477 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.74■□□□□ 0.11
ABCA1O95477 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ABCA1O95477 KRT8P11-201ENST00000409686 1436 ntBASIC15.74■□□□□ 0.11
ABCA1O95477 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ABCA1O95477 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.74■□□□□ 0.11
ABCA1O95477 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.74■□□□□ 0.11
ABCA1O95477 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ABCA1O95477 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ABCA1O95477 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ABCA1O95477 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ABCA1O95477 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.74■□□□□ 0.11
ABCA1O95477 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ABCA1O95477 AC009078.2-202ENST00000463353 338 ntBASIC15.74■□□□□ 0.11
ABCA1O95477 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ABCA1O95477 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.74■□□□□ 0.11
ABCA1O95477 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.74■□□□□ 0.11
ABCA1O95477 AL732292.2-201ENST00000609649 430 ntBASIC15.74■□□□□ 0.11
ABCA1O95477 GPALPP1-207ENST00000611650 899 ntBASIC15.74■□□□□ 0.11
ABCA1O95477 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.74■□□□□ 0.11
ABCA1O95477 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ABCA1O95477 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ABCA1O95477 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ABCA1O95477 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms