Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.68□□□□□ -0.38
SNCGO76070 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 HES6-204ENST00000409182 863 ntTSL 2 BASIC12.68□□□□□ -0.38
SNCGO76070 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SNCGO76070 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SNCGO76070 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.68□□□□□ -0.38
SNCGO76070 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 CROCCP3-202ENST00000420820 1947 ntBASIC12.68□□□□□ -0.38
SNCGO76070 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC12.68□□□□□ -0.38
SNCGO76070 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCGO76070 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
SNCGO76070 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SNCGO76070 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC12.68□□□□□ -0.38
SNCGO76070 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SNCGO76070 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCGO76070 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SNCGO76070 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.67□□□□□ -0.38
SNCGO76070 TREX1-205ENST00000625293 1783 ntBASIC12.67□□□□□ -0.38
SNCGO76070 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.67□□□□□ -0.38
SNCGO76070 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
SNCGO76070 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
SNCGO76070 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCGO76070 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SNCGO76070 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SNCGO76070 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
SNCGO76070 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.67□□□□□ -0.38
SNCGO76070 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SNCGO76070 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SNCGO76070 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCGO76070 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCGO76070 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SNCGO76070 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCGO76070 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC12.66□□□□□ -0.38
SNCGO76070 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SNCGO76070 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SNCGO76070 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SNCGO76070 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
SNCGO76070 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC12.66□□□□□ -0.38
SNCGO76070 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC12.66□□□□□ -0.38
SNCGO76070 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC12.66□□□□□ -0.38
SNCGO76070 MIR2861-201ENST00000636310 90 ntBASIC12.66□□□□□ -0.38
SNCGO76070 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SNCGO76070 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC12.66□□□□□ -0.38
SNCGO76070 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.66□□□□□ -0.38
SNCGO76070 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.66□□□□□ -0.38
SNCGO76070 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SNCGO76070 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCGO76070 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SNCGO76070 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms