Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 ZBTB20-204ENST00000463497 635 ntTSL 56.29□□□□□ -1.43e-6■■■■■ 137.9
SF3B1O75533 FOXN3-218ENST00000557718 398 ntTSL 56.28□□□□□ -1.43e-6■■■■■ 137.9
SF3B1O75533 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.28□□□□□ -1.43e-6■■■■■ 137.9
SF3B1O75533 TTC27-204ENST00000438654 297 ntTSL 36.26□□□□□ -1.413e-6■■■■■ 137.9
SF3B1O75533 RHOH-204ENST00000503978 545 ntTSL 46.26□□□□□ -1.413e-6■■■■■ 137.9
SF3B1O75533 ATR-206ENST00000513291 5190 ntTSL 1 (best)6.26□□□□□ -1.413e-6■■■■■ 137.9
SF3B1O75533 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.413e-6■■■■■ 137.9
SF3B1O75533 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.24□□□□□ -1.413e-6■■■■■ 137.9
SF3B1O75533 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.413e-6■■■■■ 137.9
SF3B1O75533 COPS3-216ENST00000579716 419 ntTSL 26.23□□□□□ -1.413e-6■■■■■ 137.9
SF3B1O75533 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.19□□□□□ -1.423e-6■■■■■ 137.9
SF3B1O75533 LPIN1-210ENST00000454151 583 ntTSL 36.19□□□□□ -1.423e-6■■■■■ 137.9
SF3B1O75533 BCAS3-230ENST00000592827 569 ntTSL 46.19□□□□□ -1.423e-6■■■■■ 137.9
SF3B1O75533 TMEM144-204ENST00000503404 4872 ntTSL 26.17□□□□□ -1.423e-6■■■■■ 137.9
SF3B1O75533 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.423e-6■■■■■ 137.9
SF3B1O75533 ARMCX5-GPRASP2-203ENST00000465548 602 ntTSL 56.15□□□□□ -1.433e-6■■■■■ 137.9
SF3B1O75533 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.13□□□□□ -1.433e-6■■■■■ 137.9
SF3B1O75533 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.12□□□□□ -1.433e-6■■■■■ 137.9
SF3B1O75533 AKAP9-212ENST00000487692 869 ntTSL 26.11□□□□□ -1.433e-6■■■■■ 137.9
SF3B1O75533 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.442e-8■■■■■ 137.9
SF3B1O75533 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.08□□□□□ -1.443e-6■■■■■ 137.9
SF3B1O75533 EXOSC8-203ENST00000464235 614 ntTSL 36.07□□□□□ -1.443e-6■■■■■ 137.9
SF3B1O75533 KIF21A-207ENST00000547733 3535 ntTSL 26.07□□□□□ -1.443e-6■■■■■ 137.9
SF3B1O75533 ATXN2-217ENST00000548492 556 ntTSL 46.04□□□□□ -1.443e-6■■■■■ 137.9
SF3B1O75533 GLA-206ENST00000486121 723 ntTSL 36.02□□□□□ -1.453e-6■■■■■ 137.9
SF3B1O75533 SERGEF-204ENST00000525168 342 ntTSL 36.02□□□□□ -1.453e-6■■■■■ 137.9
SF3B1O75533 INTS4-201ENST00000433818 3459 ntTSL 1 (best)6.02□□□□□ -1.453e-6■■■■■ 137.9
SF3B1O75533 EXTL2-204ENST00000450240 902 ntTSL 46□□□□□ -1.453e-6■■■■■ 137.9
SF3B1O75533 CYFIP1-201ENST00000557890 408 ntTSL 26□□□□□ -1.453e-6■■■■■ 137.9
SF3B1O75533 LPIN2-204ENST00000584915 491 ntTSL 35.97□□□□□ -1.453e-6■■■■■ 137.9
SF3B1O75533 CCDC162P-208ENST00000506861 508 ntTSL 45.97□□□□□ -1.453e-6■■■■■ 137.9
SF3B1O75533 RSPRY1-209ENST00000564530 3361 ntTSL 25.96□□□□□ -1.463e-6■■■■■ 137.9
SF3B1O75533 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.96□□□□□ -1.463e-6■■■■■ 137.9
SF3B1O75533 RHOH-214ENST00000515503 549 ntTSL 45.96□□□□□ -1.463e-6■■■■■ 137.9
SF3B1O75533 SRD5A3-202ENST00000505210 768 ntTSL 35.95□□□□□ -1.463e-6■■■■■ 137.9
SF3B1O75533 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.463e-6■■■■■ 137.9
SF3B1O75533 AC239868.2-201ENST00000564237 4527 ntBASIC5.92□□□□□ -1.462e-11■■■■■ 137.9
SF3B1O75533 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.92□□□□□ -1.463e-6■■■■■ 137.9
SF3B1O75533 CLASP2-211ENST00000476251 1097 ntTSL 55.9□□□□□ -1.473e-6■■■■■ 137.9
SF3B1O75533 GFM2-209ENST00000514734 907 ntTSL 55.9□□□□□ -1.473e-6■■■■■ 137.9
SF3B1O75533 DLEU1-230ENST00000489542 780 ntTSL 1 (best)5.89□□□□□ -1.473e-6■■■■■ 137.9
SF3B1O75533 PAX8-AS1-212ENST00000556070 567 ntTSL 45.89□□□□□ -1.473e-6■■■■■ 137.9
SF3B1O75533 BCAS3-223ENST00000589916 546 ntTSL 25.88□□□□□ -1.473e-6■■■■■ 137.9
SF3B1O75533 SLC41A2-202ENST00000411411 571 ntTSL 35.88□□□□□ -1.473e-6■■■■■ 137.9
SF3B1O75533 RASGRP1-210ENST00000560425 843 ntTSL 55.87□□□□□ -1.473e-6■■■■■ 137.9
SF3B1O75533 ZMYM4-203ENST00000457946 6003 ntTSL 55.86□□□□□ -1.473e-6■■■■■ 137.9
SF3B1O75533 STX18-AS1-205ENST00000514763 531 ntTSL 25.86□□□□□ -1.473e-6■■■■■ 137.9
SF3B1O75533 METTL2A-203ENST00000582027 572 ntTSL 25.85□□□□□ -1.473e-6■■■■■ 137.9
SF3B1O75533 ZNF814-206ENST00000595894 579 ntTSL 45.83□□□□□ -1.483e-6■■■■■ 137.9
SF3B1O75533 TM9SF3-206ENST00000490192 884 ntTSL 45.8□□□□□ -1.483e-6■■■■■ 137.9
SF3B1O75533 KIF21A-210ENST00000551264 3161 ntTSL 25.78□□□□□ -1.483e-6■■■■■ 137.9
SF3B1O75533 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.72□□□□□ -1.493e-6■■■■■ 137.9
SF3B1O75533 ZBTB38-221ENST00000636289 2797 ntTSL 55.71□□□□□ -1.53e-6■■■■■ 137.9
SF3B1O75533 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.53e-6■■■■■ 137.9
SF3B1O75533 FANCI-217ENST00000570225 526 ntTSL 35.67□□□□□ -1.53e-6■■■■■ 137.9
SF3B1O75533 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.66□□□□□ -1.53e-6■■■■■ 137.9
SF3B1O75533 KIAA1109-207ENST00000438707 5528 ntTSL 55.66□□□□□ -1.53e-6■■■■■ 137.9
SF3B1O75533 EXOSC8-201ENST00000239893 694 ntTSL 55.65□□□□□ -1.513e-6■■■■■ 137.9
SF3B1O75533 DGKH-205ENST00000498255 4422 ntTSL 55.65□□□□□ -1.513e-6■■■■■ 137.9
SF3B1O75533 EXOSC8-207ENST00000488108 497 ntTSL 45.63□□□□□ -1.513e-6■■■■■ 137.9
SF3B1O75533 KPNA2-205ENST00000583269 611 ntTSL 45.63□□□□□ -1.511e-16■■■■■ 137.9
SF3B1O75533 MPC1-203ENST00000366868 572 ntTSL 35.63□□□□□ -1.513e-6■■■■■ 137.9
SF3B1O75533 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.513e-6■■■■■ 137.9
SF3B1O75533 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.59□□□□□ -1.513e-6■■■■■ 137.9
SF3B1O75533 FCF1-207ENST00000554973 564 ntTSL 35.59□□□□□ -1.513e-6■■■■■ 137.9
SF3B1O75533 DGKH-209ENST00000627777 3517 ntTSL 25.58□□□□□ -1.523e-6■■■■■ 137.9
SF3B1O75533 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.523e-6■■■■■ 137.9
SF3B1O75533 AL022311.1-201ENST00000623726 19416 ntBASIC5.58□□□□□ -1.523e-6■■■■■ 137.9
SF3B1O75533 CIB2-209ENST00000561190 390 ntTSL 35.57□□□□□ -1.523e-6■■■■■ 137.9
SF3B1O75533 KAT2B-202ENST00000426228 571 ntTSL 45.56□□□□□ -1.523e-6■■■■■ 137.9
SF3B1O75533 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.523e-6■■■■■ 137.9
SF3B1O75533 MRPL58-203ENST00000583772 678 ntTSL 25.51□□□□□ -1.532e-11■■■■■ 137.9
SF3B1O75533 FAM192A-208ENST00000565353 477 ntTSL 45.48□□□□□ -1.533e-6■■■■■ 137.9
SF3B1O75533 WDR35-204ENST00000445063 2788 ntTSL 25.47□□□□□ -1.533e-6■■■■■ 137.9
SF3B1O75533 PLAA-203ENST00000517642 868 ntTSL 55.46□□□□□ -1.543e-6■■■■■ 137.9
SF3B1O75533 ATXN1-207ENST00000483954 744 ntTSL 35.44□□□□□ -1.543e-6■■■■■ 137.9
SF3B1O75533 DNAJC27-202ENST00000380809 1378 ntTSL 25.43□□□□□ -1.543e-6■■■■■ 137.9
SF3B1O75533 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.41□□□□□ -1.543e-6■■■■■ 137.9
SF3B1O75533 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.553e-6■■■■■ 137.9
SF3B1O75533 ASCC1-219ENST00000534259 2422 ntTSL 25.38□□□□□ -1.553e-6■■■■■ 137.9
SF3B1O75533 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.553e-6■■■■■ 137.9
SF3B1O75533 MAP7D3-208ENST00000495432 774 ntTSL 35.34□□□□□ -1.553e-6■■■■■ 137.9
SF3B1O75533 AEBP2-205ENST00000512223 507 ntTSL 35.34□□□□□ -1.553e-6■■■■■ 137.9
SF3B1O75533 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.563e-6■■■■■ 137.9
SF3B1O75533 CALU-204ENST00000493278 589 ntTSL 35.33□□□□□ -1.563e-6■■■■■ 137.9
SF3B1O75533 HEATR5A-202ENST00000538864 5237 ntTSL 55.27□□□□□ -1.573e-6■■■■■ 137.9
SF3B1O75533 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.573e-6■■■■■ 137.9
SF3B1O75533 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.25□□□□□ -1.573e-6■■■■■ 137.9
SF3B1O75533 ELP4-216ENST00000639097 906 ntTSL 55.23□□□□□ -1.573e-6■■■■■ 137.9
SF3B1O75533 RHOH-213ENST00000514839 560 ntTSL 45.23□□□□□ -1.573e-6■■■■■ 137.9
SF3B1O75533 HACL1-211ENST00000469454 606 ntTSL 35.2□□□□□ -1.583e-6■■■■■ 137.9
SF3B1O75533 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.583e-6■■■■■ 137.9
SF3B1O75533 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.15□□□□□ -1.583e-6■■■■■ 137.9
SF3B1O75533 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.593e-6■■■■■ 137.9
SF3B1O75533 ALG13-235ENST00000624881 876 ntTSL 55.14□□□□□ -1.593e-6■■■■■ 137.9
SF3B1O75533 MAP7D3-207ENST00000489788 502 ntTSL 55.14□□□□□ -1.593e-6■■■■■ 137.9
SF3B1O75533 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.13□□□□□ -1.593e-6■■■■■ 137.9
SF3B1O75533 ALG13-218ENST00000487141 745 ntTSL 55.12□□□□□ -1.593e-6■■■■■ 137.9
SF3B1O75533 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.1□□□□□ -1.593e-6■■■■■ 137.9
SF3B1O75533 COPS3-205ENST00000463097 288 ntTSL 25.1□□□□□ -1.593e-6■■■■■ 137.9
Retrieved 100 of 46,956 protein–RNA pairs in 1570.7 ms