RNA–Protein interactions for RNA: ENST00000409298.5

GTDC1-207, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-207ENST00000409298 AEBP2Q6ZN18 517 aaPredicted RBP13.52□□□□□ -0.25
GTDC1-207ENST00000409298 CHIC1Q5VXU3 224 aa13.02□□□□□ -0.33
GTDC1-207ENST00000409298 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
GTDC1-207ENST00000409298 SENP3Q9H4L4 574 aaPredicted RBP11.54□□□□□ -0.56
GTDC1-207ENST00000409298 PHF23Q9BUL5 403 aaPredicted RBP11.41□□□□□ -0.58
GTDC1-207ENST00000409298 PELP1Q8IZL8 1130 aaKnown RBP10.99□□□□□ -0.65
GTDC1-207ENST00000409298 MYT1Q01538 1121 aa10.77□□□□□ -0.68
GTDC1-207ENST00000409298 FOXD1Q16676 465 aa10.71□□□□□ -0.69
GTDC1-207ENST00000409298 PLPPR3Q6T4P5 718 aa10.49□□□□□ -0.73
GTDC1-207ENST00000409298 TTBK1Q5TCY1 1321 aaPredicted RBP10.37□□□□□ -0.75
GTDC1-207ENST00000409298 HRCP23327 699 aa10.33□□□□□ -0.76
GTDC1-207ENST00000409298 PPP6R1Q9UPN7 881 aa10.13□□□□□ -0.79
GTDC1-207ENST00000409298 SCAF1Q9H7N4 1312 aaKnown RBP10.11□□□□□ -0.79
GTDC1-207ENST00000409298 PRKCSHP14314 528 aaPredicted RBP10.11□□□□□ -0.79
GTDC1-207ENST00000409298 ADRA2BP18089 450 aa10.1□□□□□ -0.79
GTDC1-207ENST00000409298 PIAS4Q8N2W9 510 aaPredicted RBP10.04□□□□□ -0.8
GTDC1-207ENST00000409298 MSH5O43196 834 aa9.99□□□□□ -0.81
GTDC1-207ENST00000409298 PPARGC1BQ86YN6 1023 aaKnown RBP9.98□□□□□ -0.81
GTDC1-207ENST00000409298 BCL11AQ9H165 835 aa9.93□□□□□ -0.82
GTDC1-207ENST00000409298 APLP2Q06481 763 aa9.88□□□□□ -0.83
GTDC1-207ENST00000409298 ERICH6Q7L0X2 663 aa9.85□□□□□ -0.83
GTDC1-207ENST00000409298 FAM9AQ8IZU1 332 aaPredicted RBP9.83□□□□□ -0.84
GTDC1-207ENST00000409298 PCGF6Q9BYE7 350 aa9.67□□□□□ -0.86
GTDC1-207ENST00000409298 CENPBP07199 599 aaPredicted RBP9.67□□□□□ -0.86
GTDC1-207ENST00000409298 ACIN1Q9UKV3 1341 aaKnown RBP9.66□□□□□ -0.86
GTDC1-207ENST00000409298 SLC24A1O60721 1099 aa9.6□□□□□ -0.87
GTDC1-207ENST00000409298 NEUROD1Q13562 356 aa9.58□□□□□ -0.88
GTDC1-207ENST00000409298 GTF3C3Q9Y5Q9 886 aa9.56□□□□□ -0.88
GTDC1-207ENST00000409298 MYO15BQ96JP2 1530 aa9.53□□□□□ -0.88
GTDC1-207ENST00000409298 ANP32EQ9BTT0 268 aa9.5□□□□□ -0.89
GTDC1-207ENST00000409298 ZEB1P37275 1124 aaPredicted RBP9.49□□□□□ -0.89
GTDC1-207ENST00000409298 CCDC180Q9P1Z9 1646 aa9.39□□□□□ -0.91
GTDC1-207ENST00000409298 CSRNP3Q8WYN3 585 aa9.38□□□□□ -0.91
GTDC1-207ENST00000409298 DCAF1Q9Y4B6 1507 aa9.38□□□□□ -0.91
GTDC1-207ENST00000409298 NISCHQ9Y2I1 1504 aa9.34□□□□□ -0.91
GTDC1-207ENST00000409298 DAXXQ9UER7 740 aaPredicted RBP9.32□□□□□ -0.92
GTDC1-207ENST00000409298 TRIM26Q12899 539 aaPredicted RBP9.26□□□□□ -0.93
GTDC1-207ENST00000409298 EIF5BO60841 1220 aaKnown RBP9.23□□□□□ -0.93
GTDC1-207ENST00000409298 MAPK8IP2Q13387 824 aaPredicted RBP9.23□□□□□ -0.93
GTDC1-207ENST00000409298 UBE2Q2Q8WVN8 375 aa9.21□□□□□ -0.93
GTDC1-207ENST00000409298 ANO8Q9HCE9 1232 aaPredicted RBP9.2□□□□□ -0.94
GTDC1-207ENST00000409298 PPP4R3CPQ6ZMV5 832 aa9.2□□□□□ -0.94
GTDC1-207ENST00000409298 DMRT2Q9Y5R5 561 aa9.17□□□□□ -0.94
GTDC1-207ENST00000409298 TSHZ2Q9NRE2 1034 aa9.15□□□□□ -0.95
GTDC1-207ENST00000409298 DIEXFQ68CQ4 756 aaKnown RBP9.09□□□□□ -0.95
GTDC1-207ENST00000409298 PLEKHG5O94827 1062 aa9.05□□□□□ -0.96
GTDC1-207ENST00000409298 CLSPNQ9HAW4 1339 aa9.03□□□□□ -0.96
GTDC1-207ENST00000409298 SALL2Q9Y467 1007 aaPredicted RBP9.01□□□□□ -0.97
GTDC1-207ENST00000409298 CNKSR2Q8WXI2 1034 aa9□□□□□ -0.97
GTDC1-207ENST00000409298 SUPT16HQ9Y5B9 1047 aaKnown RBP8.99□□□□□ -0.97
GTDC1-207ENST00000409298 ERICH6BQ5W0A0 696 aa8.98□□□□□ -0.97
GTDC1-207ENST00000409298 PKNOX2Q96KN3 472 aa8.97□□□□□ -0.97
GTDC1-207ENST00000409298 TRIM41Q8WV44 630 aa8.95□□□□□ -0.98
GTDC1-207ENST00000409298 CCDC136Q96JN2 1154 aa8.94□□□□□ -0.98
GTDC1-207ENST00000409298 PODXL2Q9NZ53 605 aa8.93□□□□□ -0.98
GTDC1-207ENST00000409298 MYT1LQ9UL68 1186 aa8.93□□□□□ -0.98
GTDC1-207ENST00000409298 YTHDC1Q96MU7 727 aaKnown RBP8.93□□□□□ -0.98
GTDC1-207ENST00000409298 NCBP3Q53F19 620 aaKnown RBP8.92□□□□□ -0.98
GTDC1-207ENST00000409298 HOXD11P31277 338 aaPredicted RBP8.91□□□□□ -0.98
GTDC1-207ENST00000409298 RNF216Q9NWF9 866 aaPredicted RBP8.89□□□□□ -0.99
GTDC1-207ENST00000409298 SUPT5HO00267 1087 aaKnown RBP8.86□□□□□ -0.99
GTDC1-207ENST00000409298 DEKP35659 375 aaKnown RBP8.86□□□□□ -0.99
GTDC1-207ENST00000409298 POTEHQ6S545 545 aa8.86□□□□□ -0.99
GTDC1-207ENST00000409298 LOC105371045A0A1W2PR82 267 aa8.84□□□□□ -0.99
GTDC1-207ENST00000409298 RBM19Q9Y4C8 960 aaKnown RBP8.84□□□□□ -0.99
GTDC1-207ENST00000409298 MIER1Q8N108 512 aa8.8□□□□□ -1
GTDC1-207ENST00000409298 ZNF316A6NFI3 1004 aaPredicted RBP8.78□□□□□ -1
GTDC1-207ENST00000409298 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.78□□□□□ -1
GTDC1-207ENST00000409298 NPM3O75607 178 aaKnown RBP8.76□□□□□ -1.01
GTDC1-207ENST00000409298 FANCIQ9NVI1 1328 aa8.75□□□□□ -1.01
GTDC1-207ENST00000409298 DCAF8L1A6NGE4 600 aa8.74□□□□□ -1.01
GTDC1-207ENST00000409298 CCER1Q8TC90 406 aaPredicted RBP8.73□□□□□ -1.01
GTDC1-207ENST00000409298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.73□□□□□ -1.01
GTDC1-207ENST00000409298 KCNA4P22459 653 aa8.72□□□□□ -1.01
GTDC1-207ENST00000409298 IL27Q8NEV9 243 aa8.69□□□□□ -1.02
GTDC1-207ENST00000409298 NEFLP07196 543 aa8.68□□□□□ -1.02
GTDC1-207ENST00000409298 ABCC9O60706 1549 aa8.65□□□□□ -1.03
GTDC1-207ENST00000409298 SHROOM4Q9ULL8 1493 aa8.64□□□□□ -1.03
GTDC1-207ENST00000409298 RTN4Q9NQC3 1192 aaKnown RBP8.62□□□□□ -1.03
GTDC1-207ENST00000409298 ZMYND15Q9H091 742 aa8.61□□□□□ -1.03
GTDC1-207ENST00000409298 DNAJC5BQ9UF47 199 aa8.61□□□□□ -1.03
GTDC1-207ENST00000409298 PDE4CQ08493 712 aa8.6□□□□□ -1.03
GTDC1-207ENST00000409298 BCANQ96GW7 911 aa8.59□□□□□ -1.03
GTDC1-207ENST00000409298 PDIA4P13667 645 aaKnown RBP8.58□□□□□ -1.04
GTDC1-207ENST00000409298 FGD1P98174 961 aa8.58□□□□□ -1.04
GTDC1-207ENST00000409298 GLIPR1L2Q4G1C9 344 aa8.57□□□□□ -1.04
GTDC1-207ENST00000409298 AAMPQ13685 434 aa8.54□□□□□ -1.04
GTDC1-207ENST00000409298 FKBP8Q14318 412 aa8.54□□□□□ -1.04
GTDC1-207ENST00000409298 C11orf95C9JLR9 678 aaPredicted RBP8.53□□□□□ -1.04
GTDC1-207ENST00000409298 RNF39Q9H2S5 420 aa8.53□□□□□ -1.04
GTDC1-207ENST00000409298 VSIG10Q8N0Z9 540 aa8.52□□□□□ -1.05
GTDC1-207ENST00000409298 A0A0U1RQG5 324 aaPredicted RBP8.5□□□□□ -1.05
GTDC1-207ENST00000409298 RBM10P98175 930 aaKnown RBP8.5□□□□□ -1.05
GTDC1-207ENST00000409298 NBR1Q14596 966 aa8.5□□□□□ -1.05
GTDC1-207ENST00000409298 RSPH6AQ9H0K4 717 aa8.5□□□□□ -1.05
GTDC1-207ENST00000409298 KLHL34Q8N239 644 aa8.49□□□□□ -1.05
GTDC1-207ENST00000409298 BCL11BQ9C0K0 894 aaPredicted RBP8.48□□□□□ -1.05
GTDC1-207ENST00000409298 TIMELESSQ9UNS1 1208 aa8.48□□□□□ -1.05
GTDC1-207ENST00000409298 NOP58Q9Y2X3 529 aaKnown RBP8.48□□□□□ -1.05
GTDC1-207ENST00000409298 ITGAEP38570 1179 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms