RNA–Protein interactions for RNA: ENST00000513291.1

ATR-206, Transcript of ATR serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATR, Length 5,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-206ENST00000513291 NISCHQ9Y2I1 1504 aa11.78□□□□□ -0.52
ATR-206ENST00000513291 DCAF8L2P0C7V8 631 aa10.91□□□□□ -0.66
ATR-206ENST00000513291 SHROOM4Q9ULL8 1493 aa10.36□□□□□ -0.75
ATR-206ENST00000513291 SUPT5HO00267 1087 aaKnown RBP10.23□□□□□ -0.77
ATR-206ENST00000513291 MYT1Q01538 1121 aa10.17□□□□□ -0.78
ATR-206ENST00000513291 PELP1Q8IZL8 1130 aaKnown RBP10.11□□□□□ -0.79
ATR-206ENST00000513291 CCDC180Q9P1Z9 1646 aa10.06□□□□□ -0.8
ATR-206ENST00000513291 ABCC9O60706 1549 aa10.01□□□□□ -0.81
ATR-206ENST00000513291 ZCCHC6Q5VYS8 1495 aaKnown RBP9.82□□□□□ -0.84
ATR-206ENST00000513291 PABPN1Q86U42 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
ATR-206ENST00000513291 RB1CC1Q8TDY2 1594 aa9.62□□□□□ -0.87
ATR-206ENST00000513291 SCRIBQ14160 1630 aa9.62□□□□□ -0.87
ATR-206ENST00000513291 TRIM41Q8WV44 630 aa9.6□□□□□ -0.87
ATR-206ENST00000513291 NACADO15069 1562 aa9.59□□□□□ -0.87
ATR-206ENST00000513291 EHMT2Q96KQ7 1210 aa9.58□□□□□ -0.88
ATR-206ENST00000513291 FAM9AQ8IZU1 332 aaPredicted RBP9.55□□□□□ -0.88
ATR-206ENST00000513291 DCAF1Q9Y4B6 1507 aa9.55□□□□□ -0.88
ATR-206ENST00000513291 SLC24A1O60721 1099 aa9.49□□□□□ -0.89
ATR-206ENST00000513291 APLP2Q06481 763 aa9.47□□□□□ -0.89
ATR-206ENST00000513291 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
ATR-206ENST00000513291 TTBK1Q5TCY1 1321 aaPredicted RBP9.44□□□□□ -0.9
ATR-206ENST00000513291 MYO15BQ96JP2 1530 aa9.38□□□□□ -0.91
ATR-206ENST00000513291 RANGAP1P46060 587 aaPredicted RBP9.38□□□□□ -0.91
ATR-206ENST00000513291 UBTFP17480 764 aaKnown RBP9.37□□□□□ -0.91
ATR-206ENST00000513291 CHIC1Q5VXU3 224 aa9.36□□□□□ -0.91
ATR-206ENST00000513291 CENPBP07199 599 aaPredicted RBP9.25□□□□□ -0.93
ATR-206ENST00000513291 BAZ1AQ9NRL2 1556 aaPredicted RBP9.24□□□□□ -0.93
ATR-206ENST00000513291 RSF1Q96T23 1441 aaPredicted RBP9.23□□□□□ -0.93
ATR-206ENST00000513291 ATP1B4Q9UN42 357 aaPredicted RBP9.22□□□□□ -0.93
ATR-206ENST00000513291 BAZ1BQ9UIG0 1483 aaKnown RBP9.18□□□□□ -0.94
ATR-206ENST00000513291 CCER1Q8TC90 406 aaPredicted RBP9.15□□□□□ -0.94
ATR-206ENST00000513291 CECR2Q9BXF3 1484 aa9.14□□□□□ -0.95
ATR-206ENST00000513291 PCGF6Q9BYE7 350 aa9.14□□□□□ -0.95
ATR-206ENST00000513291 LOC105371045A0A1W2PR82 267 aa9.13□□□□□ -0.95
ATR-206ENST00000513291 SMARCA2P51531 1590 aa9.08□□□□□ -0.96
ATR-206ENST00000513291 MROH2BQ7Z745 1585 aa9.07□□□□□ -0.96
ATR-206ENST00000513291 CSRNP3Q8WYN3 585 aa9.04□□□□□ -0.96
ATR-206ENST00000513291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.03□□□□□ -0.96
ATR-206ENST00000513291 HNRNPUL2Q1KMD3 747 aaKnown RBP9.03□□□□□ -0.96
ATR-206ENST00000513291 TRIM26Q12899 539 aaPredicted RBP9.01□□□□□ -0.97
ATR-206ENST00000513291 ZEB1P37275 1124 aaPredicted RBP9.01□□□□□ -0.97
ATR-206ENST00000513291 PPARGC1BQ86YN6 1023 aaKnown RBP9□□□□□ -0.97
ATR-206ENST00000513291 SMARCA4P51532 1647 aa9□□□□□ -0.97
ATR-206ENST00000513291 TOP2AP11388 1531 aaKnown RBP8.99□□□□□ -0.97
ATR-206ENST00000513291 FBLN2P98095 1184 aa8.98□□□□□ -0.97
ATR-206ENST00000513291 WRNQ14191 1432 aaPredicted RBP eCLIP8.98□□□□□ -0.97
ATR-206ENST00000513291 WIZO95785 1651 aa8.96□□□□□ -0.97
ATR-206ENST00000513291 EEA1Q15075 1411 aa8.95□□□□□ -0.98
ATR-206ENST00000513291 ATAD2BQ9ULI0 1458 aa8.94□□□□□ -0.98
ATR-206ENST00000513291 CCDC88BA6NC98 1476 aa8.94□□□□□ -0.98
ATR-206ENST00000513291 YTHDC1Q96MU7 727 aaKnown RBP8.92□□□□□ -0.98
ATR-206ENST00000513291 ERCC6Q03468 1493 aa8.91□□□□□ -0.98
ATR-206ENST00000513291 HRCP23327 699 aa8.89□□□□□ -0.99
ATR-206ENST00000513291 ITGAEP38570 1179 aa8.89□□□□□ -0.99
ATR-206ENST00000513291 KIF27Q86VH2 1401 aa8.87□□□□□ -0.99
ATR-206ENST00000513291 PDS5BQ9NTI5 1447 aa8.86□□□□□ -0.99
ATR-206ENST00000513291 MYT1LQ9UL68 1186 aa8.86□□□□□ -0.99
ATR-206ENST00000513291 EIF4G1Q04637 1599 aaKnown RBP8.86□□□□□ -0.99
ATR-206ENST00000513291 GOLGA3Q08378 1498 aa8.84□□□□□ -0.99
ATR-206ENST00000513291 P3H3Q8IVL6 736 aa8.84□□□□□ -0.99
ATR-206ENST00000513291 CADPSQ9ULU8 1353 aa8.83□□□□□ -1
ATR-206ENST00000513291 FAM50AQ14320 339 aaKnown RBP8.82□□□□□ -1
ATR-206ENST00000513291 CHMP7Q8WUX9 453 aaPredicted RBP8.82□□□□□ -1
ATR-206ENST00000513291 NCAPD3P42695 1498 aa8.81□□□□□ -1
ATR-206ENST00000513291 CEP164Q9UPV0 1460 aa8.81□□□□□ -1
ATR-206ENST00000513291 CDK11AQ9UQ88 783 aaPredicted RBP8.8□□□□□ -1
ATR-206ENST00000513291 ABCC8Q09428 1581 aa8.79□□□□□ -1
ATR-206ENST00000513291 BICRAQ9NZM4 1560 aa8.79□□□□□ -1
ATR-206ENST00000513291 CLIP1P30622 1438 aa8.78□□□□□ -1
ATR-206ENST00000513291 NEFLP07196 543 aa8.78□□□□□ -1
ATR-206ENST00000513291 CUX2O14529 1486 aa8.77□□□□□ -1.01
ATR-206ENST00000513291 HMGXB3Q12766 1538 aa8.75□□□□□ -1.01
ATR-206ENST00000513291 TNIKQ9UKE5 1360 aa8.74□□□□□ -1.01
ATR-206ENST00000513291 CEP162Q5TB80 1403 aa8.74□□□□□ -1.01
ATR-206ENST00000513291 ARID3CA6NKF2 412 aa8.73□□□□□ -1.01
ATR-206ENST00000513291 FANCD2Q9BXW9 1451 aa8.73□□□□□ -1.01
ATR-206ENST00000513291 SOGA1O94964 1423 aa8.72□□□□□ -1.01
ATR-206ENST00000513291 CC2D2AQ9P2K1 1620 aa8.72□□□□□ -1.01
ATR-206ENST00000513291 UNC13AQ9UPW8 1703 aa8.72□□□□□ -1.01
ATR-206ENST00000513291 CARMIL1Q5VZK9 1371 aa8.71□□□□□ -1.02
ATR-206ENST00000513291 POLR3GLQ9BT43 218 aa8.7□□□□□ -1.02
ATR-206ENST00000513291 NPM1P06748 294 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATR-206ENST00000513291 GLIPR1L2Q4G1C9 344 aa8.69□□□□□ -1.02
ATR-206ENST00000513291 TRIM52Q96A61 297 aa8.69□□□□□ -1.02
ATR-206ENST00000513291 RTL5Q5HYW3 569 aaPredicted RBP8.68□□□□□ -1.02
ATR-206ENST00000513291 MTUS2Q5JR59 1369 aa8.67□□□□□ -1.02
ATR-206ENST00000513291 EIF5BO60841 1220 aaKnown RBP8.67□□□□□ -1.02
ATR-206ENST00000513291 ZNF777Q9ULD5 760 aaPredicted RBP8.65□□□□□ -1.02
ATR-206ENST00000513291 TDRD9Q8NDG6 1382 aaKnown RBP8.64□□□□□ -1.03
ATR-206ENST00000513291 CFTRP13569 1480 aa8.64□□□□□ -1.03
ATR-206ENST00000513291 FHAD1B1AJZ9 1412 aa8.63□□□□□ -1.03
ATR-206ENST00000513291 PEG3Q9GZU2 1588 aa8.62□□□□□ -1.03
ATR-206ENST00000513291 GTF3C3Q9Y5Q9 886 aa8.62□□□□□ -1.03
ATR-206ENST00000513291 FGD5Q6ZNL6 1462 aa8.6□□□□□ -1.03
ATR-206ENST00000513291 RAPGEF2Q9Y4G8 1499 aa8.6□□□□□ -1.03
ATR-206ENST00000513291 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
ATR-206ENST00000513291 PLEKHD1A6NEE1 506 aa8.58□□□□□ -1.04
ATR-206ENST00000513291 CARMIL2Q6F5E8 1435 aa8.57□□□□□ -1.04
ATR-206ENST00000513291 NEUROD1Q13562 356 aa8.56□□□□□ -1.04
ATR-206ENST00000513291 BCL11AQ9H165 835 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms