RNA–Protein interactions for RNA: ENST00000488108.5

EXOSC8-207, Transcript of exosome component 8, humanhuman

TSL 4

Gene EXOSC8, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-207ENST00000488108 AEBP2Q6ZN18 517 aaPredicted RBP29.97■■■□□ 2.39
EXOSC8-207ENST00000488108 CHIC1Q5VXU3 224 aa28.53■■■□□ 2.16
EXOSC8-207ENST00000488108 SENP3Q9H4L4 574 aaPredicted RBP25.62■■□□□ 1.69
EXOSC8-207ENST00000488108 PHF23Q9BUL5 403 aaPredicted RBP25.28■■□□□ 1.64
EXOSC8-207ENST00000488108 FOXD1Q16676 465 aa23.84■■□□□ 1.41
EXOSC8-207ENST00000488108 PLPPR3Q6T4P5 718 aa22.83■■□□□ 1.25
EXOSC8-207ENST00000488108 MSH5O43196 834 aa22.34■■□□□ 1.17
EXOSC8-207ENST00000488108 PIAS4Q8N2W9 510 aaPredicted RBP22.31■■□□□ 1.16
EXOSC8-207ENST00000488108 PPP6R1Q9UPN7 881 aa22.29■■□□□ 1.16
EXOSC8-207ENST00000488108 ADRA2BP18089 450 aa22.24■■□□□ 1.15
EXOSC8-207ENST00000488108 POTEDQ86YR6 584 aa21.72■■□□□ 1.07
EXOSC8-207ENST00000488108 MAPK8IP2Q13387 824 aaPredicted RBP20.41■□□□□ 0.86
EXOSC8-207ENST00000488108 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
EXOSC8-207ENST00000488108 DMRT2Q9Y5R5 561 aa20.31■□□□□ 0.84
EXOSC8-207ENST00000488108 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
EXOSC8-207ENST00000488108 CNKSR2Q8WXI2 1034 aa19.63■□□□□ 0.73
EXOSC8-207ENST00000488108 HOXD11P31277 338 aaPredicted RBP19.57■□□□□ 0.72
EXOSC8-207ENST00000488108 DCAF8L1A6NGE4 600 aa19.5■□□□□ 0.71
EXOSC8-207ENST00000488108 RNF216Q9NWF9 866 aaPredicted RBP19.44■□□□□ 0.7
EXOSC8-207ENST00000488108 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
EXOSC8-207ENST00000488108 CACNB1Q02641 598 aaPredicted RBP19.16■□□□□ 0.66
EXOSC8-207ENST00000488108 RNF39Q9H2S5 420 aa19.03■□□□□ 0.64
EXOSC8-207ENST00000488108 NPM3O75607 178 aaKnown RBP18.95■□□□□ 0.62
EXOSC8-207ENST00000488108 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
EXOSC8-207ENST00000488108 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
EXOSC8-207ENST00000488108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.67■□□□□ 0.585e-7■■■□□ 17.7
EXOSC8-207ENST00000488108 KCNA4P22459 653 aa18.61■□□□□ 0.57
EXOSC8-207ENST00000488108 U3KPZ7 1027 aaPredicted RBP18.25■□□□□ 0.51
EXOSC8-207ENST00000488108 SLC4A2P04920 1241 aa18.08■□□□□ 0.48
EXOSC8-207ENST00000488108 CAPN15O75808 1086 aa17.98■□□□□ 0.47
EXOSC8-207ENST00000488108 SPINK5Q9NQ38 1064 aaPredicted RBP17.97■□□□□ 0.47
EXOSC8-207ENST00000488108 DSG3P32926 999 aa17.84■□□□□ 0.45
EXOSC8-207ENST00000488108 APLP2Q06481 763 aa17.82■□□□□ 0.44
EXOSC8-207ENST00000488108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
EXOSC8-207ENST00000488108 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
EXOSC8-207ENST00000488108 TRHP20396 242 aaPredicted RBP17.7■□□□□ 0.42
EXOSC8-207ENST00000488108 SAMD1Q6SPF0 538 aaPredicted RBP17.69■□□□□ 0.42
EXOSC8-207ENST00000488108 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
EXOSC8-207ENST00000488108 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
EXOSC8-207ENST00000488108 MYCNP04198 464 aaPredicted RBP17.56■□□□□ 0.4
EXOSC8-207ENST00000488108 ABCB7O75027 752 aa17.54■□□□□ 0.4
EXOSC8-207ENST00000488108 FOXD4L1Q9NU39 408 aa17.39■□□□□ 0.37
EXOSC8-207ENST00000488108 POLA2Q14181 598 aa17.21■□□□□ 0.35
EXOSC8-207ENST00000488108 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
EXOSC8-207ENST00000488108 ZBTB22O15209 634 aa17.07■□□□□ 0.32
EXOSC8-207ENST00000488108 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
EXOSC8-207ENST00000488108 POTEHQ6S545 545 aa17.04■□□□□ 0.32
EXOSC8-207ENST00000488108 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
EXOSC8-207ENST00000488108 ATXN8OSP0DMR3 200 aa16.85■□□□□ 0.29
EXOSC8-207ENST00000488108 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
EXOSC8-207ENST00000488108 AKT1S1Q96B36 256 aa16.66■□□□□ 0.26
EXOSC8-207ENST00000488108 CHRDL2Q6WN34 429 aa16.65■□□□□ 0.26
EXOSC8-207ENST00000488108 FBLN2P98095 1184 aa16.51■□□□□ 0.23
EXOSC8-207ENST00000488108 REM2Q8IYK8 340 aaPredicted RBP16.49■□□□□ 0.23
EXOSC8-207ENST00000488108 SPDYE2BA6NHP3 402 aa16.37■□□□□ 0.21
EXOSC8-207ENST00000488108 SPDYE6P0CI01 402 aa16.37■□□□□ 0.21
EXOSC8-207ENST00000488108 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
EXOSC8-207ENST00000488108 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
EXOSC8-207ENST00000488108 MKRN4PQ13434 485 aaPredicted RBP16.32■□□□□ 0.2
EXOSC8-207ENST00000488108 PITPNM1O00562 1244 aa16.31■□□□□ 0.2
EXOSC8-207ENST00000488108 PIP4P2Q8N4L2 257 aa16.25■□□□□ 0.19
EXOSC8-207ENST00000488108 ZNF692Q9BU19 519 aaPredicted RBP16.18■□□□□ 0.18
EXOSC8-207ENST00000488108 FXR2P51116 673 aaKnown RBP eCLIP16.17■□□□□ 0.18
EXOSC8-207ENST00000488108 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
EXOSC8-207ENST00000488108 SSUH2Q9Y2M2 353 aa16.13■□□□□ 0.17
EXOSC8-207ENST00000488108 SPDYE1Q8NFV5 336 aaPredicted RBP16.09■□□□□ 0.17
EXOSC8-207ENST00000488108 CLEC11AQ9Y240 323 aa16.05■□□□□ 0.16
EXOSC8-207ENST00000488108 SP7Q8TDD2 431 aaPredicted RBP15.99■□□□□ 0.15
EXOSC8-207ENST00000488108 HAX1O00165 279 aa15.97■□□□□ 0.15
EXOSC8-207ENST00000488108 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
EXOSC8-207ENST00000488108 PRKAR2AP13861 404 aaKnown RBP15.9■□□□□ 0.14
EXOSC8-207ENST00000488108 PRR29P0C7W0 189 aa15.8■□□□□ 0.12
EXOSC8-207ENST00000488108 EVX2Q03828 476 aa15.72■□□□□ 0.11
EXOSC8-207ENST00000488108 CHADLQ6NUI6 762 aa15.71■□□□□ 0.11
EXOSC8-207ENST00000488108 C19orf67A6NJJ6 358 aa15.64■□□□□ 0.09
EXOSC8-207ENST00000488108 SPDYE4A6NLX3 237 aa15.61■□□□□ 0.09
EXOSC8-207ENST00000488108 STAG3Q9UJ98 1225 aa15.53■□□□□ 0.08
EXOSC8-207ENST00000488108 FARP1Q9Y4F1 1045 aaPredicted RBP15.5■□□□□ 0.07
EXOSC8-207ENST00000488108 GABBR2O75899 941 aa15.4■□□□□ 0.06
EXOSC8-207ENST00000488108 CD44P16070 742 aaKnown RBP15.4■□□□□ 0.06
EXOSC8-207ENST00000488108 CREBZFQ9NS37 354 aa15.38■□□□□ 0.05
EXOSC8-207ENST00000488108 CLCN6P51797 869 aa15.22■□□□□ 0.03
EXOSC8-207ENST00000488108 PROM2Q8N271 834 aa15.2■□□□□ 0.02
EXOSC8-207ENST00000488108 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
EXOSC8-207ENST00000488108 ZNF579Q8NAF0 562 aaKnown RBP15.16■□□□□ 0.02
EXOSC8-207ENST00000488108 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
EXOSC8-207ENST00000488108 PAK3O75914 559 aaPredicted RBP15.11■□□□□ 0.01
EXOSC8-207ENST00000488108 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
EXOSC8-207ENST00000488108 POTEIP0CG38 1075 aa15.05■□□□□ -0
EXOSC8-207ENST00000488108 DCBLD2Q96PD2 775 aa15.03■□□□□ -0
EXOSC8-207ENST00000488108 LHX8Q68G74 356 aa15.01□□□□□ -0.01
EXOSC8-207ENST00000488108 GALR2O43603 387 aaPredicted RBP14.97□□□□□ -0.01
EXOSC8-207ENST00000488108 PHF12Q96QT6 1004 aa14.97□□□□□ -0.01
EXOSC8-207ENST00000488108 PLEKHG5O94827 1062 aa14.93□□□□□ -0.02
EXOSC8-207ENST00000488108 MIER1Q8N108 512 aa14.89□□□□□ -0.03
EXOSC8-207ENST00000488108 FKBP8Q14318 412 aa14.85□□□□□ -0.03
EXOSC8-207ENST00000488108 TSPYL2Q9H2G4 693 aaPredicted RBP14.85□□□□□ -0.03
EXOSC8-207ENST00000488108 PLCD3Q8N3E9 789 aa14.79□□□□□ -0.04
EXOSC8-207ENST00000488108 MS4A3Q96HJ5 214 aa14.77□□□□□ -0.05
EXOSC8-207ENST00000488108 CCDC61Q9Y6R9 512 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms