Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF4O60810 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.13■□□□□ 0.49
PRAMEF4O60810 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PRAMEF4O60810 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.13■□□□□ 0.49
PRAMEF4O60810 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF4O60810 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF4O60810 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF4O60810 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF4O60810 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF4O60810 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF4O60810 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF4O60810 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF4O60810 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF4O60810 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF4O60810 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF4O60810 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PRAMEF4O60810 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PRAMEF4O60810 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF4O60810 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PRAMEF4O60810 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF4O60810 RCC2P3-201ENST00000418112 1537 ntBASIC18.12■□□□□ 0.49
PRAMEF4O60810 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF4O60810 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF4O60810 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF4O60810 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF4O60810 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF4O60810 AL357033.4-201ENST00000617703 1807 ntBASIC18.12■□□□□ 0.49
PRAMEF4O60810 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.11■□□□□ 0.49
PRAMEF4O60810 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.11■□□□□ 0.49
PRAMEF4O60810 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 MIR718-201ENST00000390190 70 ntBASIC18.11■□□□□ 0.49
PRAMEF4O60810 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.11■□□□□ 0.49
PRAMEF4O60810 CRYGFP-201ENST00000418459 633 ntBASIC18.11■□□□□ 0.49
PRAMEF4O60810 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.11■□□□□ 0.49
PRAMEF4O60810 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.11■□□□□ 0.49
PRAMEF4O60810 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PRAMEF4O60810 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.11■□□□□ 0.49
PRAMEF4O60810 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PRAMEF4O60810 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF4O60810 AC126763.1-201ENST00000552015 2118 ntBASIC18.1■□□□□ 0.49
PRAMEF4O60810 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 AL355075.4-201ENST00000554988 638 ntBASIC18.1■□□□□ 0.49
PRAMEF4O60810 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 AP000525.1-201ENST00000608286 694 ntBASIC18.1■□□□□ 0.49
PRAMEF4O60810 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF4O60810 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF4O60810 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF4O60810 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF4O60810 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF4O60810 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEF4O60810 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF4O60810 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PRAMEF4O60810 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF4O60810 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF4O60810 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEF4O60810 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PRAMEF4O60810 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEF4O60810 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEF4O60810 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF4O60810 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms