Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GMDSO60547 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GMDSO60547 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GMDSO60547 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GMDSO60547 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GMDSO60547 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.65■□□□□ 0.26
GMDSO60547 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.65■□□□□ 0.26
GMDSO60547 AC128676.1-201ENST00000454392 318 ntBASIC16.65■□□□□ 0.26
GMDSO60547 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GMDSO60547 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
GMDSO60547 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
GMDSO60547 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GMDSO60547 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GMDSO60547 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
GMDSO60547 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GMDSO60547 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.65■□□□□ 0.26
GMDSO60547 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GMDSO60547 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.65■□□□□ 0.26
GMDSO60547 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GMDSO60547 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GMDSO60547 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.65■□□□□ 0.26
GMDSO60547 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GMDSO60547 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GMDSO60547 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.65■□□□□ 0.26
GMDSO60547 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
GMDSO60547 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
GMDSO60547 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.64■□□□□ 0.25
GMDSO60547 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.64■□□□□ 0.25
GMDSO60547 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GMDSO60547 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 AC239809.2-201ENST00000415381 517 ntBASIC16.64■□□□□ 0.25
GMDSO60547 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GMDSO60547 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.64■□□□□ 0.25
GMDSO60547 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 AC233263.1-201ENST00000578059 224 ntBASIC16.64■□□□□ 0.25
GMDSO60547 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.64■□□□□ 0.25
GMDSO60547 TEX21P-204ENST00000641479 1693 ntBASIC16.64■□□□□ 0.25
GMDSO60547 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GMDSO60547 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.64■□□□□ 0.25
GMDSO60547 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GMDSO60547 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GMDSO60547 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.64■□□□□ 0.25
GMDSO60547 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 AL031598.1-201ENST00000561511 1773 ntBASIC16.64■□□□□ 0.25
GMDSO60547 AC104417.2-201ENST00000562989 1793 ntBASIC16.64■□□□□ 0.25
GMDSO60547 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GMDSO60547 AC141586.3-201ENST00000562166 1838 ntBASIC16.63■□□□□ 0.25
GMDSO60547 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
GMDSO60547 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.63■□□□□ 0.25
GMDSO60547 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.63■□□□□ 0.25
GMDSO60547 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.63■□□□□ 0.25
GMDSO60547 AC133681.1-201ENST00000465482 601 ntBASIC16.63■□□□□ 0.25
GMDSO60547 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.63■□□□□ 0.25
GMDSO60547 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
GMDSO60547 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.63■□□□□ 0.25
GMDSO60547 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
GMDSO60547 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.63■□□□□ 0.25
GMDSO60547 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
GMDSO60547 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
GMDSO60547 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
GMDSO60547 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.63■□□□□ 0.25
GMDSO60547 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.63■□□□□ 0.25
GMDSO60547 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.63■□□□□ 0.25
GMDSO60547 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GMDSO60547 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GMDSO60547 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GMDSO60547 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GMDSO60547 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GMDSO60547 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.62■□□□□ 0.25
GMDSO60547 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GMDSO60547 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GMDSO60547 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GMDSO60547 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GMDSO60547 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GMDSO60547 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms