Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGCEO43556 NOC2LP1-202ENST00000452600 2235 ntBASIC16.65■□□□□ 0.26
SGCEO43556 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SGCEO43556 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SGCEO43556 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGCEO43556 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.26
SGCEO43556 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 AC020916.1-201ENST00000587762 1774 ntBASIC16.64■□□□□ 0.25
SGCEO43556 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.64■□□□□ 0.25
SGCEO43556 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SGCEO43556 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.64■□□□□ 0.25
SGCEO43556 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.64■□□□□ 0.25
SGCEO43556 FAM197Y1-201ENST00000421178 764 ntBASIC16.64■□□□□ 0.25
SGCEO43556 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.64■□□□□ 0.25
SGCEO43556 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.64■□□□□ 0.25
SGCEO43556 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.64■□□□□ 0.25
SGCEO43556 AP001412.1-201ENST00000608405 714 ntBASIC16.64■□□□□ 0.25
SGCEO43556 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.64■□□□□ 0.25
SGCEO43556 TMEM191A-211ENST00000637163 1067 ntBASIC16.64■□□□□ 0.25
SGCEO43556 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.64■□□□□ 0.25
SGCEO43556 AC006333.2-201ENST00000607957 2099 ntBASIC16.64■□□□□ 0.25
SGCEO43556 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SGCEO43556 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGCEO43556 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.64■□□□□ 0.25
SGCEO43556 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SGCEO43556 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SGCEO43556 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SGCEO43556 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGCEO43556 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.63■□□□□ 0.25
SGCEO43556 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGCEO43556 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SGCEO43556 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SGCEO43556 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SGCEO43556 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGCEO43556 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.63■□□□□ 0.25
SGCEO43556 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGCEO43556 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGCEO43556 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SGCEO43556 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.63■□□□□ 0.25
SGCEO43556 AC012618.2-201ENST00000428058 849 ntBASIC16.63■□□□□ 0.25
SGCEO43556 AC091390.4-202ENST00000476426 537 ntBASIC16.63■□□□□ 0.25
SGCEO43556 PRSS44-201ENST00000515154 1146 ntBASIC16.63■□□□□ 0.25
SGCEO43556 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.63■□□□□ 0.25
SGCEO43556 CD177P1-201ENST00000606252 935 ntBASIC16.63■□□□□ 0.25
SGCEO43556 AC011298.2-201ENST00000617989 482 ntBASIC16.63■□□□□ 0.25
SGCEO43556 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGCEO43556 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGCEO43556 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SGCEO43556 AC004408.2-201ENST00000623613 2777 ntBASIC16.63■□□□□ 0.25
SGCEO43556 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGCEO43556 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.63■□□□□ 0.25
SGCEO43556 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.62■□□□□ 0.25
SGCEO43556 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 KRT8P11-201ENST00000409686 1436 ntBASIC16.62■□□□□ 0.25
SGCEO43556 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.62■□□□□ 0.25
SGCEO43556 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.62■□□□□ 0.25
SGCEO43556 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.62■□□□□ 0.25
SGCEO43556 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 RPS2P55-201ENST00000397318 883 ntBASIC16.62■□□□□ 0.25
SGCEO43556 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 AC107956.1-201ENST00000494359 873 ntBASIC16.62■□□□□ 0.25
SGCEO43556 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SGCEO43556 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.62■□□□□ 0.25
SGCEO43556 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.62■□□□□ 0.25
SGCEO43556 MIR6786-201ENST00000616843 113 ntBASIC16.62■□□□□ 0.25
SGCEO43556 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.62■□□□□ 0.25
SGCEO43556 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.62■□□□□ 0.25
SGCEO43556 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.62■□□□□ 0.25
SGCEO43556 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGCEO43556 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms