Protein–RNA interactions for Protein: O43294

TGFB1I1, Transforming growth factor beta-1-induced transcript 1 protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1O43294 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TGFB1I1O43294 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TGFB1I1O43294 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TGFB1I1O43294 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TGFB1I1O43294 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TGFB1I1O43294 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TGFB1I1O43294 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.52■□□□□ 0.88
TGFB1I1O43294 CCR12P-201ENST00000446203 998 ntBASIC20.52■□□□□ 0.88
TGFB1I1O43294 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.52■□□□□ 0.88
TGFB1I1O43294 NAPSB-206ENST00000562112 1266 ntBASIC20.52■□□□□ 0.88
TGFB1I1O43294 AC116562.4-202ENST00000641738 218 ntBASIC20.52■□□□□ 0.88
TGFB1I1O43294 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TGFB1I1O43294 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TGFB1I1O43294 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TGFB1I1O43294 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TGFB1I1O43294 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TGFB1I1O43294 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
TGFB1I1O43294 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TGFB1I1O43294 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
TGFB1I1O43294 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TGFB1I1O43294 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.52■□□□□ 0.87
TGFB1I1O43294 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TGFB1I1O43294 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFB1I1O43294 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFB1I1O43294 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFB1I1O43294 AC120498.9-201ENST00000339021 3867 ntBASIC20.51■□□□□ 0.87
TGFB1I1O43294 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFB1I1O43294 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFB1I1O43294 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFB1I1O43294 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFB1I1O43294 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 AC087499.1-201ENST00000418141 1075 ntBASIC20.51■□□□□ 0.87
TGFB1I1O43294 MCCD1P1-208ENST00000445732 328 ntBASIC20.51■□□□□ 0.87
TGFB1I1O43294 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFB1I1O43294 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.51■□□□□ 0.87
TGFB1I1O43294 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TGFB1I1O43294 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TGFB1I1O43294 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFB1I1O43294 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFB1I1O43294 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFB1I1O43294 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TGFB1I1O43294 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFB1I1O43294 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TGFB1I1O43294 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 MIR564-202ENST00000385049 94 ntBASIC20.5■□□□□ 0.87
TGFB1I1O43294 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TGFB1I1O43294 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFB1I1O43294 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.5■□□□□ 0.87
TGFB1I1O43294 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFB1I1O43294 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TGFB1I1O43294 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFB1I1O43294 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TGFB1I1O43294 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.5■□□□□ 0.87
TGFB1I1O43294 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TGFB1I1O43294 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TGFB1I1O43294 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TGFB1I1O43294 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TGFB1I1O43294 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TGFB1I1O43294 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 AC010653.2-201ENST00000623505 997 ntBASIC20.49■□□□□ 0.87
TGFB1I1O43294 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.49■□□□□ 0.87
TGFB1I1O43294 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TGFB1I1O43294 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms