Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.88■□□□□ 0.61
PFDN6O15212 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN6O15212 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
PFDN6O15212 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN6O15212 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PFDN6O15212 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PFDN6O15212 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
PFDN6O15212 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PFDN6O15212 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.87■□□□□ 0.61
PFDN6O15212 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.87■□□□□ 0.61
PFDN6O15212 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.87■□□□□ 0.61
PFDN6O15212 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PFDN6O15212 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.87■□□□□ 0.61
PFDN6O15212 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.87■□□□□ 0.61
PFDN6O15212 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.87■□□□□ 0.61
PFDN6O15212 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.87■□□□□ 0.61
PFDN6O15212 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN6O15212 AC083906.6-201ENST00000641366 219 ntBASIC18.87■□□□□ 0.61
PFDN6O15212 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.87■□□□□ 0.61
PFDN6O15212 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PFDN6O15212 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PFDN6O15212 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
PFDN6O15212 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN6O15212 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.86■□□□□ 0.61
PFDN6O15212 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN6O15212 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.86■□□□□ 0.61
PFDN6O15212 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN6O15212 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN6O15212 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.86■□□□□ 0.61
PFDN6O15212 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN6O15212 KRT8P11-201ENST00000409686 1436 ntBASIC18.86■□□□□ 0.61
PFDN6O15212 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.86■□□□□ 0.61
PFDN6O15212 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PFDN6O15212 GCSHP5-201ENST00000443090 522 ntBASIC18.86■□□□□ 0.61
PFDN6O15212 FAM207BP-201ENST00000447172 505 ntBASIC18.86■□□□□ 0.61
PFDN6O15212 AC091390.4-202ENST00000476426 537 ntBASIC18.86■□□□□ 0.61
PFDN6O15212 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.86■□□□□ 0.61
PFDN6O15212 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.86■□□□□ 0.61
PFDN6O15212 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN6O15212 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN6O15212 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN6O15212 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.86■□□□□ 0.61
PFDN6O15212 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN6O15212 AC004408.2-201ENST00000623613 2777 ntBASIC18.86■□□□□ 0.61
PFDN6O15212 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PFDN6O15212 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PFDN6O15212 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.85■□□□□ 0.61
PFDN6O15212 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PFDN6O15212 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.85■□□□□ 0.61
PFDN6O15212 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.85■□□□□ 0.61
PFDN6O15212 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PFDN6O15212 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.85■□□□□ 0.61
PFDN6O15212 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.85■□□□□ 0.61
PFDN6O15212 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.85■□□□□ 0.61
PFDN6O15212 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.85■□□□□ 0.61
PFDN6O15212 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.85■□□□□ 0.61
PFDN6O15212 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.85■□□□□ 0.61
PFDN6O15212 CD177P1-201ENST00000606252 935 ntBASIC18.85■□□□□ 0.61
PFDN6O15212 MIR6786-201ENST00000616843 113 ntBASIC18.85■□□□□ 0.61
PFDN6O15212 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.85■□□□□ 0.61
PFDN6O15212 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PFDN6O15212 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.85■□□□□ 0.61
PFDN6O15212 Z98044.1-201ENST00000632503 1764 ntBASIC18.85■□□□□ 0.61
PFDN6O15212 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PFDN6O15212 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PFDN6O15212 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.85■□□□□ 0.61
PFDN6O15212 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PFDN6O15212 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.85■□□□□ 0.61
PFDN6O15212 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms