Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.44■□□□□ 0.38
TNFRSF11BO00300 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 AL162741.1-201ENST00000565563 1558 ntBASIC17.44■□□□□ 0.38
TNFRSF11BO00300 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF11BO00300 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 AC120498.8-201ENST00000614275 531 ntBASIC17.43■□□□□ 0.38
TNFRSF11BO00300 AP000997.3-201ENST00000623333 2250 ntBASIC17.43■□□□□ 0.38
TNFRSF11BO00300 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNFRSF11BO00300 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 AC026185.1-201ENST00000445748 174 ntBASIC17.42■□□□□ 0.38
TNFRSF11BO00300 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 HLA-B-256ENST00000639848 1089 ntBASIC17.42■□□□□ 0.38
TNFRSF11BO00300 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.42■□□□□ 0.38
TNFRSF11BO00300 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 AC067852.2-201ENST00000590513 2313 ntBASIC17.41■□□□□ 0.38
TNFRSF11BO00300 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 TSPY23P-201ENST00000440136 739 ntBASIC17.41■□□□□ 0.38
TNFRSF11BO00300 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 MIR5787-201ENST00000611784 55 ntBASIC17.41■□□□□ 0.38
TNFRSF11BO00300 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF11BO00300 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.4■□□□□ 0.38
TNFRSF11BO00300 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms