Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
LINC00473A8K010 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 AC073592.3-201ENST00000625118 1834 ntBASIC15.34■□□□□ 0.05
LINC00473A8K010 MTMR9LP-203ENST00000426597 1545 ntBASIC15.34■□□□□ 0.05
LINC00473A8K010 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
LINC00473A8K010 AL499627.1-201ENST00000569373 2188 ntBASIC15.34■□□□□ 0.05
LINC00473A8K010 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 NIFKP9-201ENST00000419265 221 ntBASIC15.34■□□□□ 0.05
LINC00473A8K010 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LINC00473A8K010 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00473A8K010 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.34■□□□□ 0.05
LINC00473A8K010 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC00473A8K010 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.34■□□□□ 0.05
LINC00473A8K010 AC131212.4-201ENST00000623606 975 ntBASIC15.34■□□□□ 0.05
LINC00473A8K010 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00473A8K010 AC073648.6-201ENST00000641589 218 ntBASIC15.34■□□□□ 0.05
LINC00473A8K010 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
LINC00473A8K010 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.34■□□□□ 0.05
LINC00473A8K010 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.34■□□□□ 0.05
LINC00473A8K010 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00473A8K010 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LINC00473A8K010 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC00473A8K010 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.34■□□□□ 0.05
LINC00473A8K010 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC00473A8K010 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00473A8K010 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.05
LINC00473A8K010 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00473A8K010 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00473A8K010 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00473A8K010 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00473A8K010 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00473A8K010 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC00473A8K010 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
LINC00473A8K010 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LINC00473A8K010 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.33■□□□□ 0.04
LINC00473A8K010 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 AC006058.3-201ENST00000606217 1069 ntBASIC15.33■□□□□ 0.04
LINC00473A8K010 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.33■□□□□ 0.04
LINC00473A8K010 AC068587.9-201ENST00000641814 219 ntBASIC15.33■□□□□ 0.04
LINC00473A8K010 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC00473A8K010 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
LINC00473A8K010 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00473A8K010 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC00473A8K010 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC00473A8K010 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00473A8K010 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00473A8K010 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00473A8K010 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00473A8K010 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LINC00473A8K010 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00473A8K010 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00473A8K010 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00473A8K010 RPS2P4-201ENST00000476944 856 ntBASIC15.32■□□□□ 0.04
LINC00473A8K010 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LINC00473A8K010 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00473A8K010 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00473A8K010 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00473A8K010 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00473A8K010 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LINC00473A8K010 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms