Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RBFOX3A6NFN3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 AC046158.3-201ENST00000624947 2558 ntBASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 AC138028.4-201ENST00000564984 1845 ntBASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 AC018695.7-201ENST00000624587 2492 ntBASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 SDHAP1-207ENST00000440850 2000 ntBASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RBFOX3A6NFN3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 AC011270.2-201ENST00000624293 2550 ntBASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 FER1L4-210ENST00000615531 5998 ntBASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 TSPY26P-201ENST00000476365 1326 ntBASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RBFOX3A6NFN3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms