Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 AGGF1P2-201ENST00000426656 2106 ntBASIC15.32■□□□□ 0.04
LINC00862A6NCI5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LINC00862A6NCI5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 pRNA.6-201ENST00000610482 90 ntBASIC15.31■□□□□ 0.04
LINC00862A6NCI5 pRNA.5-201ENST00000612139 90 ntBASIC15.31■□□□□ 0.04
LINC00862A6NCI5 pRNA.11-201ENST00000618423 90 ntBASIC15.31■□□□□ 0.04
LINC00862A6NCI5 pRNA.13-201ENST00000619112 90 ntBASIC15.31■□□□□ 0.04
LINC00862A6NCI5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.31■□□□□ 0.04
LINC00862A6NCI5 AC026691.1-201ENST00000602502 2017 ntBASIC15.31■□□□□ 0.04
LINC00862A6NCI5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LINC00862A6NCI5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.3■□□□□ 0.04
LINC00862A6NCI5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00862A6NCI5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 DUX4L18-201ENST00000553347 1267 ntBASIC15.29■□□□□ 0.04
LINC00862A6NCI5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 AC093677.2-201ENST00000600169 1863 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms