Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 MIR1238-201ENST00000408483 83 ntBASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 TSPY15P-201ENST00000457163 923 ntBASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PCDHB13Q9Y5F0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 AC093503.3-201ENST00000624917 2352 ntBASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB13Q9Y5F0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 AL390955.1-201ENST00000428694 934 ntBASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 AC083906.6-201ENST00000641366 219 ntBASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB13Q9Y5F0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 AC090142.2-201ENST00000483263 416 ntBASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 AL512353.2-201ENST00000448759 1962 ntBASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB13Q9Y5F0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB13Q9Y5F0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PCDHB13Q9Y5F0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PCDHB13Q9Y5F0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB13Q9Y5F0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB13Q9Y5F0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB13Q9Y5F0 KRT8P32-201ENST00000512863 1461 ntBASIC20.78■□□□□ 0.92
PCDHB13Q9Y5F0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB13Q9Y5F0 MMP23A-201ENST00000234610 1017 ntBASIC20.78■□□□□ 0.92
PCDHB13Q9Y5F0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.78■□□□□ 0.92
PCDHB13Q9Y5F0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB13Q9Y5F0 SLC25A1P2-201ENST00000430693 912 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms