Protein–RNA interactions for Protein: Q9Y4A8

NFE2L3, Nuclear factor erythroid 2-related factor 3, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE2L3Q9Y4A8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NFE2L3Q9Y4A8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.94■□□□□ 0.94
NFE2L3Q9Y4A8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NFE2L3Q9Y4A8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NFE2L3Q9Y4A8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.94■□□□□ 0.94
NFE2L3Q9Y4A8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.93■□□□□ 0.94
NFE2L3Q9Y4A8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 AC073592.3-201ENST00000625118 1834 ntBASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 AC008403.3-201ENST00000598924 454 ntBASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
NFE2L3Q9Y4A8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 AC004264.1-201ENST00000608354 794 ntBASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 AP006294.2-201ENST00000641667 209 ntBASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NFE2L3Q9Y4A8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NFE2L3Q9Y4A8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms