Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBQLN1Q9UMX0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 GCSHP2-201ENST00000560971 527 ntBASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 AC068587.9-201ENST00000641814 219 ntBASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
UBQLN1Q9UMX0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 SLC25A24-204ENST00000569674 2357 ntBASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.2■□□□□ 0.82
UBQLN1Q9UMX0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 AC087388.1-201ENST00000571370 1112 ntBASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.19■□□□□ 0.82
UBQLN1Q9UMX0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms