Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPO2Q9UMS6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 AL136038.4-201ENST00000603606 1261 ntBASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 AFG3L1P-217ENST00000557444 2447 ntBASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYNPO2Q9UMS6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SYNPO2Q9UMS6 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.7■■□□□ 1.07
SYNPO2Q9UMS6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 MIR662-201ENST00000384847 95 ntBASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 AC009065.1-201ENST00000564055 1225 ntBASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 AC083906.6-201ENST00000641366 219 ntBASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPO2Q9UMS6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 AC073130.3-201ENST00000624389 2278 ntBASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 AL391807.1-203ENST00000604392 2365 ntBASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 PVRIG2P-201ENST00000435460 978 ntBASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPO2Q9UMS6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 AP000593.1-201ENST00000393668 712 ntBASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 ATP5G2P1-201ENST00000433580 426 ntBASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 Z98044.1-201ENST00000632503 1764 ntBASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYNPO2Q9UMS6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 AC093525.10-201ENST00000625130 1569 ntBASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 MTMR9LP-203ENST00000426597 1545 ntBASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms