Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.54■□□□□ 0.88
GCNT4Q9P109 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.54■□□□□ 0.88
GCNT4Q9P109 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.53■□□□□ 0.88
GCNT4Q9P109 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
GCNT4Q9P109 AC004951.3-201ENST00000418645 1148 ntBASIC20.53■□□□□ 0.88
GCNT4Q9P109 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.53■□□□□ 0.88
GCNT4Q9P109 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 AC012306.2-201ENST00000609350 630 ntBASIC20.53■□□□□ 0.88
GCNT4Q9P109 AL031985.4-201ENST00000642138 673 ntBASIC20.53■□□□□ 0.88
GCNT4Q9P109 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
GCNT4Q9P109 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GCNT4Q9P109 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.53■□□□□ 0.88
GCNT4Q9P109 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.53■□□□□ 0.88
GCNT4Q9P109 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GCNT4Q9P109 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
GCNT4Q9P109 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.52■□□□□ 0.88
GCNT4Q9P109 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.52■□□□□ 0.88
GCNT4Q9P109 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.52■□□□□ 0.88
GCNT4Q9P109 PRSS44-201ENST00000515154 1146 ntBASIC20.52■□□□□ 0.88
GCNT4Q9P109 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.52■□□□□ 0.88
GCNT4Q9P109 REXO1L10P-201ENST00000615707 1290 ntBASIC20.52■□□□□ 0.88
GCNT4Q9P109 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.52■□□□□ 0.88
GCNT4Q9P109 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.52■□□□□ 0.88
GCNT4Q9P109 AC097493.4-201ENST00000641197 219 ntBASIC20.52■□□□□ 0.88
GCNT4Q9P109 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GCNT4Q9P109 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GCNT4Q9P109 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
GCNT4Q9P109 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.52■□□□□ 0.87
GCNT4Q9P109 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
GCNT4Q9P109 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
GCNT4Q9P109 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
GCNT4Q9P109 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GCNT4Q9P109 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCNT4Q9P109 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCNT4Q9P109 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCNT4Q9P109 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
GCNT4Q9P109 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
GCNT4Q9P109 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCNT4Q9P109 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.51■□□□□ 0.87
GCNT4Q9P109 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.51■□□□□ 0.87
GCNT4Q9P109 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.51■□□□□ 0.87
GCNT4Q9P109 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCNT4Q9P109 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
GCNT4Q9P109 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.51■□□□□ 0.87
GCNT4Q9P109 AC011298.2-201ENST00000617989 482 ntBASIC20.51■□□□□ 0.87
GCNT4Q9P109 AC133561.5-201ENST00000635547 218 ntBASIC20.51■□□□□ 0.87
GCNT4Q9P109 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCNT4Q9P109 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
GCNT4Q9P109 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCNT4Q9P109 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.51■□□□□ 0.87
GCNT4Q9P109 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCNT4Q9P109 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GCNT4Q9P109 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.51■□□□□ 0.87
GCNT4Q9P109 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
GCNT4Q9P109 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GCNT4Q9P109 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCNT4Q9P109 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCNT4Q9P109 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GCNT4Q9P109 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCNT4Q9P109 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.5■□□□□ 0.87
GCNT4Q9P109 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCNT4Q9P109 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCNT4Q9P109 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GCNT4Q9P109 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
GCNT4Q9P109 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.5■□□□□ 0.87
GCNT4Q9P109 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GCNT4Q9P109 RBM17P1-201ENST00000453646 1190 ntBASIC20.5■□□□□ 0.87
GCNT4Q9P109 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.5■□□□□ 0.87
GCNT4Q9P109 AC116562.2-201ENST00000507042 360 ntBASIC20.5■□□□□ 0.87
GCNT4Q9P109 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.5■□□□□ 0.87
GCNT4Q9P109 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
GCNT4Q9P109 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms