Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 KRT8P32-201ENST00000512863 1461 ntBASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 AC120057.1-201ENST00000483947 663 ntBASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 AL353719.1-201ENST00000566847 864 ntBASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 AC092338.2-201ENST00000568827 1415 ntBASIC17.81■□□□□ 0.44
PRDM9Q9NQV7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 AL589935.2-201ENST00000616471 1231 ntBASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 AC010653.2-201ENST00000623505 997 ntBASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.8■□□□□ 0.44
PRDM9Q9NQV7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 Z98044.1-201ENST00000632503 1764 ntBASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 CROCCP3-202ENST00000420820 1947 ntBASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 AC007663.1-201ENST00000438948 1240 ntBASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 ECEL1P2-202ENST00000465689 757 ntBASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 AC068587.9-201ENST00000641814 219 ntBASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.79■□□□□ 0.44
PRDM9Q9NQV7 AC098818.2-201ENST00000564925 2320 ntBASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 INGX-201ENST00000359239 846 ntBASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 AC005363.2-201ENST00000618631 242 ntBASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRDM9Q9NQV7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms