Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 LINC01311-201ENST00000565162 1445 ntBASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 DUSP5P1-201ENST00000441325 1139 ntBASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM9SF3Q9HD45 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TM9SF3Q9HD45 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TM9SF3Q9HD45 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
TM9SF3Q9HD45 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TM9SF3Q9HD45 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
TM9SF3Q9HD45 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TM9SF3Q9HD45 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TM9SF3Q9HD45 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TM9SF3Q9HD45 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TM9SF3Q9HD45 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
TM9SF3Q9HD45 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.83■□□□□ 0.61
TM9SF3Q9HD45 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TM9SF3Q9HD45 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 SPDYE15P-201ENST00000424157 909 ntBASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 CR769767.2-201ENST00000622735 460 ntBASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TM9SF3Q9HD45 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 AC098818.2-201ENST00000564925 2320 ntBASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM9SF3Q9HD45 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 ZNF815P-204ENST00000434898 1737 ntBASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.81■□□□□ 0.6
TM9SF3Q9HD45 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms