Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 RN7SL471P-201ENST00000580476 299 ntBASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 AC131212.4-201ENST00000623606 975 ntBASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 RCC2P6-201ENST00000526625 1557 ntBASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 KRT8P11-201ENST00000409686 1436 ntBASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRTM1Q9HBL6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 HEIH-201ENST00000623091 1652 ntBASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 AL390961.4-201ENST00000623958 2535 ntBASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 CD99P1-205ENST00000527459 561 ntBASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LRTM1Q9HBL6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 ABHD17AP1-201ENST00000358206 933 ntBASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 NIFKP9-201ENST00000419265 221 ntBASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 AC004980.1-204ENST00000429707 299 ntBASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms