Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 FAM197Y1-201ENST00000421178 764 ntBASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 AL158047.1-201ENST00000445918 881 ntBASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 AC011506.1-201ENST00000474329 610 ntBASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 CD177P1-201ENST00000606252 935 ntBASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 KRT8P3-201ENST00000519669 1449 ntBASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 FSCN1P1-201ENST00000568912 1481 ntBASIC19.16■□□□□ 0.66
LRRC40Q9H9A6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 ANO7L1-203ENST00000602586 1720 ntBASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 AC008040.2-201ENST00000461049 708 ntBASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 CKBP1-201ENST00000565489 1086 ntBASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC40Q9H9A6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC40Q9H9A6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC40Q9H9A6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC40Q9H9A6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 NEFHP1-201ENST00000412845 2629 ntBASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 HEIH-201ENST00000623091 1652 ntBASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
LRRC40Q9H9A6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 MESTP1-201ENST00000404287 994 ntBASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 AP001412.1-201ENST00000608405 714 ntBASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC40Q9H9A6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms