Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.9■□□□□ 0.78
LHX5Q9H2C1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LHX5Q9H2C1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LHX5Q9H2C1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 TSPY17P-201ENST00000450329 467 ntBASIC19.89■□□□□ 0.77
LHX5Q9H2C1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 AL353719.1-201ENST00000566847 864 ntBASIC19.89■□□□□ 0.77
LHX5Q9H2C1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LHX5Q9H2C1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 ANO7L1-203ENST00000602586 1720 ntBASIC19.88■□□□□ 0.77
LHX5Q9H2C1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 AL023284.2-201ENST00000405850 579 ntBASIC19.88■□□□□ 0.77
LHX5Q9H2C1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.88■□□□□ 0.77
LHX5Q9H2C1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 AC092338.2-201ENST00000568827 1415 ntBASIC19.87■□□□□ 0.77
LHX5Q9H2C1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 TSPY14P-201ENST00000303979 915 ntBASIC19.87■□□□□ 0.77
LHX5Q9H2C1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 GPAT2P1-201ENST00000444924 1672 ntBASIC19.87■□□□□ 0.77
LHX5Q9H2C1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LHX5Q9H2C1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 AL020996.1-203ENST00000536896 2307 ntBASIC19.86■□□□□ 0.77
LHX5Q9H2C1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.86■□□□□ 0.77
LHX5Q9H2C1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 CCR12P-201ENST00000446203 998 ntBASIC19.86■□□□□ 0.77
LHX5Q9H2C1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 C2orf69P3-201ENST00000565542 1120 ntBASIC19.86■□□□□ 0.77
LHX5Q9H2C1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LHX5Q9H2C1 AL357033.4-201ENST00000617703 1807 ntBASIC19.86■□□□□ 0.77
LHX5Q9H2C1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LHX5Q9H2C1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.85■□□□□ 0.77
LHX5Q9H2C1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LHX5Q9H2C1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.85■□□□□ 0.77
LHX5Q9H2C1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LHX5Q9H2C1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LHX5Q9H2C1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LHX5Q9H2C1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LHX5Q9H2C1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LHX5Q9H2C1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LHX5Q9H2C1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.85■□□□□ 0.77
LHX5Q9H2C1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.85■□□□□ 0.77
LHX5Q9H2C1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms