Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS11Q9H270 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
VPS11Q9H270 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS11Q9H270 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
VPS11Q9H270 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS11Q9H270 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS11Q9H270 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
VPS11Q9H270 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS11Q9H270 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
VPS11Q9H270 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS11Q9H270 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.98■□□□□ 0.63
VPS11Q9H270 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.98■□□□□ 0.63
VPS11Q9H270 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.98■□□□□ 0.63
VPS11Q9H270 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS11Q9H270 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.98■□□□□ 0.63
VPS11Q9H270 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VPS11Q9H270 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VPS11Q9H270 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS11Q9H270 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS11Q9H270 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
VPS11Q9H270 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS11Q9H270 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS11Q9H270 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS11Q9H270 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS11Q9H270 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS11Q9H270 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS11Q9H270 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS11Q9H270 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS11Q9H270 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.97■□□□□ 0.63
VPS11Q9H270 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VPS11Q9H270 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS11Q9H270 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS11Q9H270 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
VPS11Q9H270 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VPS11Q9H270 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VPS11Q9H270 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
VPS11Q9H270 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
VPS11Q9H270 AC073592.3-201ENST00000625118 1834 ntBASIC18.96■□□□□ 0.63
VPS11Q9H270 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VPS11Q9H270 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.96■□□□□ 0.63
VPS11Q9H270 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.96■□□□□ 0.63
VPS11Q9H270 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.96■□□□□ 0.63
VPS11Q9H270 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.96■□□□□ 0.63
VPS11Q9H270 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.96■□□□□ 0.63
VPS11Q9H270 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
VPS11Q9H270 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
VPS11Q9H270 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VPS11Q9H270 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
VPS11Q9H270 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS11Q9H270 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VPS11Q9H270 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.95■□□□□ 0.62
VPS11Q9H270 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
VPS11Q9H270 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
VPS11Q9H270 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.95■□□□□ 0.62
VPS11Q9H270 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS11Q9H270 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS11Q9H270 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS11Q9H270 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
VPS11Q9H270 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms