Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 AC027369.1-202ENST00000534734 1330 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 GABARAPL3-201ENST00000412799 354 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC01090-201ENST00000415357 881 ntTSL 3 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 FNTAP2-201ENST00000430308 634 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 SNRPFP2-201ENST00000440710 251 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 AC114878.1-201ENST00000441166 358 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 VN1R34P-201ENST00000447387 883 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 AC020718.1-201ENST00000456031 556 ntTSL 4 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 OR4C49P-201ENST00000563891 900 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 AC087481.2-201ENST00000565492 330 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 TMSB15B-206ENST00000569577 663 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 ULK4P2-205ENST00000570221 634 ntTSL 3 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 AC079210.1-201ENST00000589826 384 ntTSL 2 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 OR7E16P-201ENST00000592975 885 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 BNIP3P34-201ENST00000600724 572 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 AC011373.1-201ENST00000607270 237 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 U62317.2-201ENST00000609178 602 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 AC013489.3-201ENST00000623274 517 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 C18orf12-201ENST00000623329 537 ntBASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KRTAP3-3Q9BYR6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 MTND4P27-201ENST00000450813 1354 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 MME-217ENST00000616757 1315 ntTSL 5 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 ODCP-201ENST00000459650 1639 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 OR5H15-201ENST00000383696 930 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 C2orf76-204ENST00000409877 950 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 RAP1BP1-201ENST00000412709 553 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 CNOT7P2-201ENST00000441051 832 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 MTND4P19-201ENST00000446659 478 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 SSU72P1-201ENST00000449911 583 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 HMGN1P8-201ENST00000463578 288 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC01140-203ENST00000469312 1298 ntTSL 5 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 FAM104B-205ENST00000477847 1170 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC01210-204ENST00000478772 1288 ntTSL 5 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 AC021451.1-201ENST00000523498 1129 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 OR4A9P-201ENST00000526326 944 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 AC005838.2-201ENST00000584643 317 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 DUX4L11-201ENST00000611504 1267 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 AC010271.2-201ENST00000614440 588 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 DUX4L12-201ENST00000614593 1267 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 AC010133.1-201ENST00000615809 842 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 DUX4L14-201ENST00000621227 1267 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC01727-204ENST00000624385 940 ntTSL 5 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 AC133561.1-201ENST00000568600 2415 ntBASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 POLR1D-206ENST00000489647 1723 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
KRTAP3-3Q9BYR6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 MRPS27-205ENST00000513900 1369 ntTSL 2 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 PTGR2-203ENST00000553813 1351 ntTSL 5 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms