RNA–Protein interactions for RNA: ENST00000624385.1

LINC01727-204, Transcript of long intergenic non-protein coding RNA 1727, humanhuman

TSL 5 BASIC

Gene LINC01727, Length 940 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01727-204ENST00000624385 AEBP2Q6ZN18 517 aaPredicted RBP26.24■■□□□ 1.79
LINC01727-204ENST00000624385 CHIC1Q5VXU3 224 aa24.54■■□□□ 1.52
LINC01727-204ENST00000624385 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
LINC01727-204ENST00000624385 PHF23Q9BUL5 403 aaPredicted RBP22.12■■□□□ 1.13
LINC01727-204ENST00000624385 FOXD1Q16676 465 aa20.97■□□□□ 0.95
LINC01727-204ENST00000624385 NISCHQ9Y2I1 1504 aa20.13■□□□□ 0.81
LINC01727-204ENST00000624385 POTEDQ86YR6 584 aa20■□□□□ 0.79
LINC01727-204ENST00000624385 MSH5O43196 834 aa19.81■□□□□ 0.76
LINC01727-204ENST00000624385 PIAS4Q8N2W9 510 aaPredicted RBP19.5■□□□□ 0.71
LINC01727-204ENST00000624385 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
LINC01727-204ENST00000624385 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
LINC01727-204ENST00000624385 ADRA2BP18089 450 aa19.21■□□□□ 0.67
LINC01727-204ENST00000624385 CCDC180Q9P1Z9 1646 aa17.79■□□□□ 0.44
LINC01727-204ENST00000624385 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
LINC01727-204ENST00000624385 DMRT2Q9Y5R5 561 aa17.75■□□□□ 0.43
LINC01727-204ENST00000624385 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
LINC01727-204ENST00000624385 ABCC9O60706 1549 aa17.47■□□□□ 0.39
LINC01727-204ENST00000624385 CACNB1Q02641 598 aaPredicted RBP17.23■□□□□ 0.35
LINC01727-204ENST00000624385 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
LINC01727-204ENST00000624385 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
LINC01727-204ENST00000624385 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
LINC01727-204ENST00000624385 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
LINC01727-204ENST00000624385 RNF39Q9H2S5 420 aa16.86■□□□□ 0.29
LINC01727-204ENST00000624385 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
LINC01727-204ENST00000624385 ZCCHC6Q5VYS8 1495 aaKnown RBP16.77■□□□□ 0.28
LINC01727-204ENST00000624385 NACADO15069 1562 aa16.77■□□□□ 0.27
LINC01727-204ENST00000624385 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
LINC01727-204ENST00000624385 RNF216Q9NWF9 866 aaPredicted RBP16.72■□□□□ 0.27
LINC01727-204ENST00000624385 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
LINC01727-204ENST00000624385 DCAF1Q9Y4B6 1507 aa16.61■□□□□ 0.25
LINC01727-204ENST00000624385 C1QBPQ07021 282 aaKnown RBP16.6■□□□□ 0.25
LINC01727-204ENST00000624385 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
LINC01727-204ENST00000624385 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC01727-204ENST00000624385 SCRIBQ14160 1630 aa16.33■□□□□ 0.2
LINC01727-204ENST00000624385 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
LINC01727-204ENST00000624385 BICRAQ9NZM4 1560 aa16.22■□□□□ 0.19
LINC01727-204ENST00000624385 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
LINC01727-204ENST00000624385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.17
LINC01727-204ENST00000624385 SHROOM4Q9ULL8 1493 aa16.09■□□□□ 0.17
LINC01727-204ENST00000624385 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
LINC01727-204ENST00000624385 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.12
LINC01727-204ENST00000624385 U3KPZ7 1027 aaPredicted RBP15.75■□□□□ 0.11
LINC01727-204ENST00000624385 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
LINC01727-204ENST00000624385 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.1
LINC01727-204ENST00000624385 DSG3P32926 999 aa15.65■□□□□ 0.1
LINC01727-204ENST00000624385 CAPN15O75808 1086 aa15.63■□□□□ 0.09
LINC01727-204ENST00000624385 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
LINC01727-204ENST00000624385 BAZ1AQ9NRL2 1556 aaPredicted RBP15.61■□□□□ 0.09
LINC01727-204ENST00000624385 POTEHQ6S545 545 aa15.6■□□□□ 0.09
LINC01727-204ENST00000624385 SMARCA4P51532 1647 aa15.58■□□□□ 0.09
LINC01727-204ENST00000624385 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
LINC01727-204ENST00000624385 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.08
LINC01727-204ENST00000624385 NCAPD3P42695 1498 aa15.49■□□□□ 0.07
LINC01727-204ENST00000624385 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
LINC01727-204ENST00000624385 BAZ1BQ9UIG0 1483 aaKnown RBP15.42■□□□□ 0.06
LINC01727-204ENST00000624385 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
LINC01727-204ENST00000624385 PEG3Q9GZU2 1588 aa15.4■□□□□ 0.06
LINC01727-204ENST00000624385 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
LINC01727-204ENST00000624385 WIZO95785 1651 aa15.35■□□□□ 0.05
LINC01727-204ENST00000624385 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
LINC01727-204ENST00000624385 APLP2Q06481 763 aa15.3■□□□□ 0.04
LINC01727-204ENST00000624385 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
LINC01727-204ENST00000624385 KCNA4P22459 653 aa15.29■□□□□ 0.04
LINC01727-204ENST00000624385 ZNF219Q9P2Y4 722 aaPredicted RBP15.26■□□□□ 0.03
LINC01727-204ENST00000624385 ABCB7O75027 752 aa15.23■□□□□ 0.03
LINC01727-204ENST00000624385 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
LINC01727-204ENST00000624385 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
LINC01727-204ENST00000624385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.18■□□□□ 0.02
LINC01727-204ENST00000624385 HNRNPUL2Q1KMD3 747 aaKnown RBP15.18■□□□□ 0.02
LINC01727-204ENST00000624385 NESP48681 1621 aa15.12■□□□□ 0.01
LINC01727-204ENST00000624385 CADPSQ9ULU8 1353 aa15.09■□□□□ 0.01
LINC01727-204ENST00000624385 ERCC6Q03468 1493 aa15.08■□□□□ 0.01
LINC01727-204ENST00000624385 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
LINC01727-204ENST00000624385 CCDC88BA6NC98 1476 aa15.05■□□□□ -0
LINC01727-204ENST00000624385 LAMC3Q9Y6N6 1575 aa15.05■□□□□ -0
LINC01727-204ENST00000624385 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
LINC01727-204ENST00000624385 CFTRP13569 1480 aa14.97□□□□□ -0.01
LINC01727-204ENST00000624385 RBM42Q9BTD8 480 aaKnown RBP14.95□□□□□ -0.02
LINC01727-204ENST00000624385 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
LINC01727-204ENST00000624385 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
LINC01727-204ENST00000624385 CEP164Q9UPV0 1460 aa14.87□□□□□ -0.03
LINC01727-204ENST00000624385 MRC2Q9UBG0 1479 aa14.82□□□□□ -0.04
LINC01727-204ENST00000624385 CUX2O14529 1486 aa14.82□□□□□ -0.04
LINC01727-204ENST00000624385 THOC2Q8NI27 1593 aaKnown RBP14.8□□□□□ -0.04
LINC01727-204ENST00000624385 POLA2Q14181 598 aa14.79□□□□□ -0.04
LINC01727-204ENST00000624385 MYCNP04198 464 aaPredicted RBP14.78□□□□□ -0.04
LINC01727-204ENST00000624385 CHRDL2Q6WN34 429 aa14.77□□□□□ -0.05
LINC01727-204ENST00000624385 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
LINC01727-204ENST00000624385 WDR62O43379 1518 aa14.73□□□□□ -0.05
LINC01727-204ENST00000624385 URB2Q14146 1524 aaKnown RBP14.72□□□□□ -0.05
LINC01727-204ENST00000624385 ABCC8Q09428 1581 aa14.65□□□□□ -0.06
LINC01727-204ENST00000624385 TOPBP1Q92547 1522 aa14.65□□□□□ -0.06
LINC01727-204ENST00000624385 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
LINC01727-204ENST00000624385 CUX1P39880 1505 aa14.56□□□□□ -0.08
LINC01727-204ENST00000624385 IFT140Q96RY7 1462 aa14.55□□□□□ -0.08
LINC01727-204ENST00000624385 WRNQ14191 1432 aaPredicted RBP eCLIP14.54□□□□□ -0.08
LINC01727-204ENST00000624385 POLA1P09884 1462 aaPredicted RBP14.53□□□□□ -0.08
LINC01727-204ENST00000624385 AKT1S1Q96B36 256 aa14.53□□□□□ -0.08
LINC01727-204ENST00000624385 FGD5Q6ZNL6 1462 aa14.52□□□□□ -0.08
LINC01727-204ENST00000624385 SOGA1O94964 1423 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms