RNA–Protein interactions for RNA: ENST00000412599.5

LINC00301-202, long intergenic non-protein coding RNA 301, humanhuman

TSL 1 (best) BASIC

Gene LINC00301, Length 772 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00301-202ENST00000412599 AEBP2Q6ZN18 517 aaPredicted RBP26.35■■□□□ 1.81
LINC00301-202ENST00000412599 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
LINC00301-202ENST00000412599 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
LINC00301-202ENST00000412599 PHF23Q9BUL5 403 aaPredicted RBP22.09■■□□□ 1.13
LINC00301-202ENST00000412599 FOXD1Q16676 465 aa20.97■□□□□ 0.95
LINC00301-202ENST00000412599 MSH5O43196 834 aa19.64■□□□□ 0.73
LINC00301-202ENST00000412599 POTEDQ86YR6 584 aa19.63■□□□□ 0.73
LINC00301-202ENST00000412599 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
LINC00301-202ENST00000412599 PIAS4Q8N2W9 510 aaPredicted RBP19.47■□□□□ 0.71
LINC00301-202ENST00000412599 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
LINC00301-202ENST00000412599 ADRA2BP18089 450 aa19.33■□□□□ 0.68
LINC00301-202ENST00000412599 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
LINC00301-202ENST00000412599 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.44
LINC00301-202ENST00000412599 SCAF1Q9H7N4 1312 aaKnown RBP17.56■□□□□ 0.4
LINC00301-202ENST00000412599 PPP4R3CPQ6ZMV5 832 aa17.16■□□□□ 0.34
LINC00301-202ENST00000412599 HOXD11P31277 338 aaPredicted RBP17.03■□□□□ 0.32
LINC00301-202ENST00000412599 CACNB1Q02641 598 aaPredicted RBP16.96■□□□□ 0.31
LINC00301-202ENST00000412599 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
LINC00301-202ENST00000412599 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
LINC00301-202ENST00000412599 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
LINC00301-202ENST00000412599 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
LINC00301-202ENST00000412599 C1QBPQ07021 282 aaKnown RBP16.48■□□□□ 0.23
LINC00301-202ENST00000412599 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
LINC00301-202ENST00000412599 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
LINC00301-202ENST00000412599 NPM3O75607 178 aaKnown RBP16.23■□□□□ 0.19
LINC00301-202ENST00000412599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
LINC00301-202ENST00000412599 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
LINC00301-202ENST00000412599 KCNA4P22459 653 aa15.72■□□□□ 0.11
LINC00301-202ENST00000412599 SPINK5Q9NQ38 1064 aaPredicted RBP15.7■□□□□ 0.1
LINC00301-202ENST00000412599 DSG3P32926 999 aa15.64■□□□□ 0.09
LINC00301-202ENST00000412599 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
LINC00301-202ENST00000412599 CAPN15O75808 1086 aa15.59■□□□□ 0.09
LINC00301-202ENST00000412599 POTEHQ6S545 545 aa15.3■□□□□ 0.04
LINC00301-202ENST00000412599 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
LINC00301-202ENST00000412599 ZNF219Q9P2Y4 722 aaPredicted RBP15.26■□□□□ 0.03
LINC00301-202ENST00000412599 ABCB7O75027 752 aa15.25■□□□□ 0.03
LINC00301-202ENST00000412599 APLP2Q06481 763 aa15.24■□□□□ 0.03
LINC00301-202ENST00000412599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
LINC00301-202ENST00000412599 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
LINC00301-202ENST00000412599 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
LINC00301-202ENST00000412599 MYCNP04198 464 aaPredicted RBP14.97□□□□□ -0.01
LINC00301-202ENST00000412599 POLA2Q14181 598 aa14.84□□□□□ -0.03
LINC00301-202ENST00000412599 RBM42Q9BTD8 480 aaKnown RBP14.84□□□□□ -0.03
LINC00301-202ENST00000412599 SLC4A1APQ9BWU0 796 aaKnown RBP14.73□□□□□ -0.05
LINC00301-202ENST00000412599 ATF5Q9Y2D1 282 aaPredicted RBP14.73□□□□□ -0.05
LINC00301-202ENST00000412599 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
LINC00301-202ENST00000412599 CHRDL2Q6WN34 429 aa14.67□□□□□ -0.06
LINC00301-202ENST00000412599 ZBTB22O15209 634 aa14.52□□□□□ -0.09
LINC00301-202ENST00000412599 AKT1S1Q96B36 256 aa14.49□□□□□ -0.09
LINC00301-202ENST00000412599 ZBTB12Q9Y330 459 aaPredicted RBP14.49□□□□□ -0.09
LINC00301-202ENST00000412599 OSCARQ8IYS5 282 aa14.43□□□□□ -0.1
LINC00301-202ENST00000412599 REM2Q8IYK8 340 aaPredicted RBP14.38□□□□□ -0.11
LINC00301-202ENST00000412599 PIP4P2Q8N4L2 257 aa14.29□□□□□ -0.12
LINC00301-202ENST00000412599 ATXN8OSP0DMR3 200 aa14.26□□□□□ -0.13
LINC00301-202ENST00000412599 PITPNM1O00562 1244 aa14.25□□□□□ -0.13
LINC00301-202ENST00000412599 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
LINC00301-202ENST00000412599 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC00301-202ENST00000412599 SPDYE2BA6NHP3 402 aa14.06□□□□□ -0.16
LINC00301-202ENST00000412599 SPDYE6P0CI01 402 aa14.06□□□□□ -0.16
LINC00301-202ENST00000412599 SPDYE2Q495Y8 402 aa14.06□□□□□ -0.16
LINC00301-202ENST00000412599 MKRN4PQ13434 485 aaPredicted RBP14.05□□□□□ -0.16
LINC00301-202ENST00000412599 FBLN2P98095 1184 aa14.02□□□□□ -0.17
LINC00301-202ENST00000412599 HAX1O00165 279 aa14□□□□□ -0.17
LINC00301-202ENST00000412599 EVX2Q03828 476 aa13.95□□□□□ -0.18
LINC00301-202ENST00000412599 SSUH2Q9Y2M2 353 aa13.93□□□□□ -0.18
LINC00301-202ENST00000412599 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
LINC00301-202ENST00000412599 PRKAR2AP13861 404 aaKnown RBP13.83□□□□□ -0.2
LINC00301-202ENST00000412599 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
LINC00301-202ENST00000412599 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
LINC00301-202ENST00000412599 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
LINC00301-202ENST00000412599 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
LINC00301-202ENST00000412599 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC00301-202ENST00000412599 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
LINC00301-202ENST00000412599 GABBR2O75899 941 aa13.56□□□□□ -0.24
LINC00301-202ENST00000412599 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
LINC00301-202ENST00000412599 FARP1Q9Y4F1 1045 aaPredicted RBP13.41□□□□□ -0.26
LINC00301-202ENST00000412599 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
LINC00301-202ENST00000412599 CD44P16070 742 aaKnown RBP13.38□□□□□ -0.27
LINC00301-202ENST00000412599 POTEIP0CG38 1075 aa13.35□□□□□ -0.27
LINC00301-202ENST00000412599 LHX8Q68G74 356 aa13.32□□□□□ -0.28
LINC00301-202ENST00000412599 CREBZFQ9NS37 354 aa13.26□□□□□ -0.29
LINC00301-202ENST00000412599 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
LINC00301-202ENST00000412599 CLCN6P51797 869 aa13.19□□□□□ -0.3
LINC00301-202ENST00000412599 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
LINC00301-202ENST00000412599 STAG3Q9UJ98 1225 aa13.16□□□□□ -0.3
LINC00301-202ENST00000412599 ZRANB1Q9UGI0 708 aa13.13□□□□□ -0.31
LINC00301-202ENST00000412599 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
LINC00301-202ENST00000412599 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
LINC00301-202ENST00000412599 DCBLD2Q96PD2 775 aa13.05□□□□□ -0.32
LINC00301-202ENST00000412599 PHF12Q96QT6 1004 aa13□□□□□ -0.33
LINC00301-202ENST00000412599 PROM2Q8N271 834 aa12.93□□□□□ -0.34
LINC00301-202ENST00000412599 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
LINC00301-202ENST00000412599 POTEB2H3BUK9 544 aa12.89□□□□□ -0.35
LINC00301-202ENST00000412599 NPM1P06748 294 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC00301-202ENST00000412599 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
LINC00301-202ENST00000412599 OTUD5Q96G74 571 aa12.86□□□□□ -0.35
LINC00301-202ENST00000412599 MS4A3Q96HJ5 214 aa12.82□□□□□ -0.36
LINC00301-202ENST00000412599 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
LINC00301-202ENST00000412599 ATMINO43313 823 aaPredicted RBP12.73□□□□□ -0.37
LINC00301-202ENST00000412599 CCDC61Q9Y6R9 512 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms