RNA–Protein interactions for RNA: ENST00000548457.1

AC009803.3-201, humanhuman

TSL 3 BASIC

Gene AC009803.3, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009803.3-201ENST00000548457 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
AC009803.3-201ENST00000548457 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
AC009803.3-201ENST00000548457 SENP3Q9H4L4 574 aaPredicted RBP22.68■■□□□ 1.22
AC009803.3-201ENST00000548457 PHF23Q9BUL5 403 aaPredicted RBP22.33■■□□□ 1.17
AC009803.3-201ENST00000548457 FOXD1Q16676 465 aa21.03■□□□□ 0.96
AC009803.3-201ENST00000548457 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
AC009803.3-201ENST00000548457 MSH5O43196 834 aa19.74■□□□□ 0.75
AC009803.3-201ENST00000548457 PIAS4Q8N2W9 510 aaPredicted RBP19.74■□□□□ 0.75
AC009803.3-201ENST00000548457 PPP6R1Q9UPN7 881 aa19.72■□□□□ 0.75
AC009803.3-201ENST00000548457 ADRA2BP18089 450 aa19.68■□□□□ 0.74
AC009803.3-201ENST00000548457 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
AC009803.3-201ENST00000548457 SCAF1Q9H7N4 1312 aaKnown RBP18.15■□□□□ 0.5
AC009803.3-201ENST00000548457 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
AC009803.3-201ENST00000548457 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
AC009803.3-201ENST00000548457 PPP4R3CPQ6ZMV5 832 aa17.82■□□□□ 0.44
AC009803.3-201ENST00000548457 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
AC009803.3-201ENST00000548457 HOXD11P31277 338 aaPredicted RBP17.37■□□□□ 0.37
AC009803.3-201ENST00000548457 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
AC009803.3-201ENST00000548457 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
AC009803.3-201ENST00000548457 DCAF8L1A6NGE4 600 aa17.22■□□□□ 0.35
AC009803.3-201ENST00000548457 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
AC009803.3-201ENST00000548457 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
AC009803.3-201ENST00000548457 CACNB1Q02641 598 aaPredicted RBP16.81■□□□□ 0.28
AC009803.3-201ENST00000548457 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
AC009803.3-201ENST00000548457 KCNA4P22459 653 aa16.69■□□□□ 0.26
AC009803.3-201ENST00000548457 C1QBPQ07021 282 aaKnown RBP16.6■□□□□ 0.25
AC009803.3-201ENST00000548457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.56■□□□□ 0.24
AC009803.3-201ENST00000548457 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
AC009803.3-201ENST00000548457 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
AC009803.3-201ENST00000548457 CAPN15O75808 1086 aa15.91■□□□□ 0.14
AC009803.3-201ENST00000548457 APLP2Q06481 763 aa15.91■□□□□ 0.14
AC009803.3-201ENST00000548457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
AC009803.3-201ENST00000548457 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
AC009803.3-201ENST00000548457 SPINK5Q9NQ38 1064 aaPredicted RBP15.89■□□□□ 0.13
AC009803.3-201ENST00000548457 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
AC009803.3-201ENST00000548457 SAMD1Q6SPF0 538 aaPredicted RBP15.78■□□□□ 0.12
AC009803.3-201ENST00000548457 DSG3P32926 999 aa15.76■□□□□ 0.11
AC009803.3-201ENST00000548457 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
AC009803.3-201ENST00000548457 MYCNP04198 464 aaPredicted RBP15.72■□□□□ 0.11
AC009803.3-201ENST00000548457 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
AC009803.3-201ENST00000548457 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
AC009803.3-201ENST00000548457 ABCB7O75027 752 aa15.51■□□□□ 0.07
AC009803.3-201ENST00000548457 ZBTB22O15209 634 aa15.32■□□□□ 0.04
AC009803.3-201ENST00000548457 POLA2Q14181 598 aa15.27■□□□□ 0.04
AC009803.3-201ENST00000548457 ATF5Q9Y2D1 282 aaPredicted RBP15.21■□□□□ 0.03
AC009803.3-201ENST00000548457 ATXN8OSP0DMR3 200 aa15.15■□□□□ 0.02
AC009803.3-201ENST00000548457 RBM42Q9BTD8 480 aaKnown RBP15.14■□□□□ 0.01
AC009803.3-201ENST00000548457 ZBTB12Q9Y330 459 aaPredicted RBP15.1■□□□□ 0.01
AC009803.3-201ENST00000548457 POTEHQ6S545 545 aa14.89□□□□□ -0.03
AC009803.3-201ENST00000548457 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
AC009803.3-201ENST00000548457 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
AC009803.3-201ENST00000548457 CSRNP3Q8WYN3 585 aa14.75□□□□□ -0.05
AC009803.3-201ENST00000548457 FBLN2P98095 1184 aa14.74□□□□□ -0.05
AC009803.3-201ENST00000548457 CHRDL2Q6WN34 429 aa14.68□□□□□ -0.06
AC009803.3-201ENST00000548457 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
AC009803.3-201ENST00000548457 SPDYE2BA6NHP3 402 aa14.6□□□□□ -0.07
AC009803.3-201ENST00000548457 SPDYE6P0CI01 402 aa14.6□□□□□ -0.07
AC009803.3-201ENST00000548457 SPDYE2Q495Y8 402 aa14.6□□□□□ -0.07
AC009803.3-201ENST00000548457 REM2Q8IYK8 340 aaPredicted RBP14.58□□□□□ -0.08
AC009803.3-201ENST00000548457 MKRN4PQ13434 485 aaPredicted RBP14.54□□□□□ -0.08
AC009803.3-201ENST00000548457 PITPNM1O00562 1244 aa14.43□□□□□ -0.1
AC009803.3-201ENST00000548457 ZNF692Q9BU19 519 aaPredicted RBP14.4□□□□□ -0.1
AC009803.3-201ENST00000548457 SSUH2Q9Y2M2 353 aa14.39□□□□□ -0.11
AC009803.3-201ENST00000548457 PIP4P2Q8N4L2 257 aa14.34□□□□□ -0.11
AC009803.3-201ENST00000548457 SPDYE1Q8NFV5 336 aaPredicted RBP14.3□□□□□ -0.12
AC009803.3-201ENST00000548457 FXR2P51116 673 aaKnown RBP eCLIP14.28□□□□□ -0.12
AC009803.3-201ENST00000548457 CLEC11AQ9Y240 323 aa14.22□□□□□ -0.13
AC009803.3-201ENST00000548457 PABPN1Q86U42 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
AC009803.3-201ENST00000548457 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
AC009803.3-201ENST00000548457 HAX1O00165 279 aa14.04□□□□□ -0.16
AC009803.3-201ENST00000548457 SP7Q8TDD2 431 aaPredicted RBP14.04□□□□□ -0.16
AC009803.3-201ENST00000548457 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
AC009803.3-201ENST00000548457 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
AC009803.3-201ENST00000548457 STAG3Q9UJ98 1225 aa13.91□□□□□ -0.18
AC009803.3-201ENST00000548457 CHADLQ6NUI6 762 aa13.9□□□□□ -0.18
AC009803.3-201ENST00000548457 C19orf67A6NJJ6 358 aa13.83□□□□□ -0.2
AC009803.3-201ENST00000548457 EVX2Q03828 476 aa13.79□□□□□ -0.2
AC009803.3-201ENST00000548457 FARP1Q9Y4F1 1045 aaPredicted RBP13.75□□□□□ -0.21
AC009803.3-201ENST00000548457 PROM2Q8N271 834 aa13.68□□□□□ -0.22
AC009803.3-201ENST00000548457 CREBZFQ9NS37 354 aa13.68□□□□□ -0.22
AC009803.3-201ENST00000548457 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
AC009803.3-201ENST00000548457 GABBR2O75899 941 aa13.57□□□□□ -0.24
AC009803.3-201ENST00000548457 CLCN6P51797 869 aa13.53□□□□□ -0.24
AC009803.3-201ENST00000548457 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
AC009803.3-201ENST00000548457 PAK3O75914 559 aaPredicted RBP13.46□□□□□ -0.25
AC009803.3-201ENST00000548457 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
AC009803.3-201ENST00000548457 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
AC009803.3-201ENST00000548457 MNX1P50219 401 aaPredicted RBP13.45□□□□□ -0.26
AC009803.3-201ENST00000548457 FKBP8Q14318 412 aa13.41□□□□□ -0.26
AC009803.3-201ENST00000548457 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
AC009803.3-201ENST00000548457 MIER1Q8N108 512 aa13.32□□□□□ -0.28
AC009803.3-201ENST00000548457 DCBLD2Q96PD2 775 aa13.28□□□□□ -0.28
AC009803.3-201ENST00000548457 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
AC009803.3-201ENST00000548457 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
AC009803.3-201ENST00000548457 POTEIP0CG38 1075 aa13.23□□□□□ -0.29
AC009803.3-201ENST00000548457 ZBTB47Q9UFB7 747 aaPredicted RBP13.23□□□□□ -0.29
AC009803.3-201ENST00000548457 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
AC009803.3-201ENST00000548457 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
AC009803.3-201ENST00000548457 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
AC009803.3-201ENST00000548457 LHX8Q68G74 356 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms