Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHRDL1Q9BU40 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 FZD10-202ENST00000539839 3282 ntBASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 TEX21P-204ENST00000641479 1693 ntBASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CHRDL1Q9BU40 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 CD99P1-205ENST00000527459 561 ntBASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 AL023875.1-201ENST00000640777 796 ntBASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRDL1Q9BU40 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRDL1Q9BU40 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms