Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CRAMP1Q96RY5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.06■■□□□ 1.28
CRAMP1Q96RY5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CRAMP1Q96RY5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.06■■□□□ 1.28
CRAMP1Q96RY5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CRAMP1Q96RY5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CRAMP1Q96RY5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CRAMP1Q96RY5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CRAMP1Q96RY5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 SLC25A6P4-201ENST00000586535 553 ntBASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 GPR32P1-201ENST00000601788 811 ntBASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.05■■□□□ 1.28
CRAMP1Q96RY5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CRAMP1Q96RY5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CRAMP1Q96RY5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CRAMP1Q96RY5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CRAMP1Q96RY5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.04■■□□□ 1.28
CRAMP1Q96RY5 LINC01006-201ENST00000333319 2292 ntBASIC23.04■■□□□ 1.28
CRAMP1Q96RY5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
CRAMP1Q96RY5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CRAMP1Q96RY5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CRAMP1Q96RY5 AC034236.2-201ENST00000606662 1610 ntBASIC23.04■■□□□ 1.28
CRAMP1Q96RY5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CRAMP1Q96RY5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 FEM1AP3-201ENST00000403722 1741 ntBASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 IGHGP-201ENST00000390555 1178 ntBASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 IGHV3-47-201ENST00000425060 335 ntBASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CRAMP1Q96RY5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 AC006333.2-201ENST00000607957 2099 ntBASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 TREX1-205ENST00000625293 1783 ntBASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 AL022342.1-201ENST00000400363 863 ntBASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 RN7SL606P-201ENST00000472779 293 ntBASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 Z69720.1-201ENST00000601483 472 ntBASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 AL121912.1-201ENST00000603683 238 ntBASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 AC138894.3-201ENST00000603787 634 ntBASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 AL353801.3-201ENST00000609898 542 ntBASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.02■■□□□ 1.28
CRAMP1Q96RY5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 AC112907.3-201ENST00000577781 2400 ntBASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 LINC00167-201ENST00000530583 1419 ntBASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 KRT16P4-201ENST00000453883 522 ntBASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC23.01■■□□□ 1.27
CRAMP1Q96RY5 AL662844.1-201ENST00000546340 181 ntBASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms