Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB3IPQ96QF0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
RAB3IPQ96QF0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB3IPQ96QF0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB3IPQ96QF0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB3IPQ96QF0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB3IPQ96QF0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RAB3IPQ96QF0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 FER1L4-210ENST00000615531 5998 ntBASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 PBX2P1-201ENST00000493219 1291 ntBASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 CCDC92B-201ENST00000575506 885 ntBASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 TPRG1LP1-201ENST00000598702 760 ntBASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 AC106739.1-201ENST00000617035 715 ntBASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 AD000864.1-201ENST00000624076 2295 ntBASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 FEM1AP3-201ENST00000403722 1741 ntBASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB3IPQ96QF0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB3IPQ96QF0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB3IPQ96QF0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.39■□□□□ 0.54
RAB3IPQ96QF0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB3IPQ96QF0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
RAB3IPQ96QF0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB3IPQ96QF0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB3IPQ96QF0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 AC080080.1-201ENST00000625121 2420 ntBASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 MIR572-201ENST00000384983 95 ntBASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 CYP21A1P-202ENST00000354927 1481 ntBASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB3IPQ96QF0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms