Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC46A1Q96NT5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 BX276092.5-203ENST00000456199 560 ntBASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 AL121672.3-201ENST00000608644 468 ntBASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 AL158211.5-201ENST00000623583 2518 ntBASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 AC016734.2-201ENST00000624325 1377 ntBASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC46A1Q96NT5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 SLC25A24-204ENST00000569674 2357 ntBASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 AC004870.1-201ENST00000315132 882 ntBASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 AC111152.3-201ENST00000569699 673 ntBASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC46A1Q96NT5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC46A1Q96NT5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC46A1Q96NT5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
SLC46A1Q96NT5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.02■□□□□ 0.47
SLC46A1Q96NT5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC46A1Q96NT5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SLC46A1Q96NT5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
SLC46A1Q96NT5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC46A1Q96NT5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 AL845331.1-201ENST00000424978 1190 ntBASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 ZNF815P-204ENST00000434898 1737 ntBASIC18.01■□□□□ 0.47
SLC46A1Q96NT5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SLC46A1Q96NT5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC46A1Q96NT5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18■□□□□ 0.47
SLC46A1Q96NT5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18■□□□□ 0.47
SLC46A1Q96NT5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18■□□□□ 0.47
SLC46A1Q96NT5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18■□□□□ 0.47
SLC46A1Q96NT5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC46A1Q96NT5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SLC46A1Q96NT5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18■□□□□ 0.47
SLC46A1Q96NT5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC46A1Q96NT5 FAAHP1-202ENST00000446499 1238 ntBASIC18■□□□□ 0.47
SLC46A1Q96NT5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC46A1Q96NT5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC46A1Q96NT5 MIR3180-1-201ENST00000580374 94 ntBASIC18■□□□□ 0.47
SLC46A1Q96NT5 MIR3180-3-201ENST00000584616 94 ntBASIC18■□□□□ 0.47
SLC46A1Q96NT5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18■□□□□ 0.47
SLC46A1Q96NT5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18■□□□□ 0.47
SLC46A1Q96NT5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18■□□□□ 0.47
SLC46A1Q96NT5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18■□□□□ 0.47
SLC46A1Q96NT5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms