Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CMTM3Q96MX0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 AC112777.1-201ENST00000540175 1423 ntBASIC16.22■□□□□ 0.19
CMTM3Q96MX0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CMTM3Q96MX0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 KRT17P1-201ENST00000399211 1546 ntBASIC16.21■□□□□ 0.19
CMTM3Q96MX0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 AL512625.2-201ENST00000417533 625 ntBASIC16.21■□□□□ 0.19
CMTM3Q96MX0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 KRT18P16-201ENST00000510337 1294 ntBASIC16.21■□□□□ 0.19
CMTM3Q96MX0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 AC005829.2-201ENST00000571422 1056 ntBASIC16.21■□□□□ 0.19
CMTM3Q96MX0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CMTM3Q96MX0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
CMTM3Q96MX0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CMTM3Q96MX0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CMTM3Q96MX0 HTR7P1-202ENST00000624664 4411 ntBASIC16.2■□□□□ 0.18
CMTM3Q96MX0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 FZD10-202ENST00000539839 3282 ntBASIC16.2■□□□□ 0.18
CMTM3Q96MX0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.2■□□□□ 0.18
CMTM3Q96MX0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms