Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 ATP5G2P1-201ENST00000433580 426 ntBASIC18.89■□□□□ 0.61
SIPA1Q96FS4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 CLEC4GP1-201ENST00000596555 870 ntBASIC18.89■□□□□ 0.61
SIPA1Q96FS4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIPA1Q96FS4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 SEC1P-202ENST00000473944 940 ntBASIC18.88■□□□□ 0.61
SIPA1Q96FS4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 AL121894.2-201ENST00000602977 491 ntBASIC18.88■□□□□ 0.61
SIPA1Q96FS4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIPA1Q96FS4 PCDHAC2-203ENST00000615316 3011 ntBASIC18.87■□□□□ 0.61
SIPA1Q96FS4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 AL450487.1-201ENST00000426799 995 ntBASIC18.87■□□□□ 0.61
SIPA1Q96FS4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SIPA1Q96FS4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 TEX21P-204ENST00000641479 1693 ntBASIC18.86■□□□□ 0.61
SIPA1Q96FS4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.86■□□□□ 0.61
SIPA1Q96FS4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIPA1Q96FS4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms