Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC11Q96DB2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.42■□□□□ 0.7
HDAC11Q96DB2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC11Q96DB2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 AC093525.10-201ENST00000625130 1569 ntBASIC19.41■□□□□ 0.7
HDAC11Q96DB2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 AC004408.2-201ENST00000623613 2777 ntBASIC19.41■□□□□ 0.7
HDAC11Q96DB2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 AC096733.2-201ENST00000609937 1394 ntBASIC19.41■□□□□ 0.7
HDAC11Q96DB2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC11Q96DB2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 AC026471.5-201ENST00000615068 467 ntBASIC19.4■□□□□ 0.7
HDAC11Q96DB2 REXO1L10P-201ENST00000615707 1290 ntBASIC19.4■□□□□ 0.7
HDAC11Q96DB2 REXO1L12P-201ENST00000622156 912 ntBASIC19.4■□□□□ 0.7
HDAC11Q96DB2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 AP006294.2-201ENST00000641667 209 ntBASIC19.4■□□□□ 0.7
HDAC11Q96DB2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.4■□□□□ 0.7
HDAC11Q96DB2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HDAC11Q96DB2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HDAC11Q96DB2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HDAC11Q96DB2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HDAC11Q96DB2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 AL355355.2-201ENST00000442321 338 ntBASIC19.39■□□□□ 0.69
HDAC11Q96DB2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 KRT8P3-201ENST00000519669 1449 ntBASIC19.39■□□□□ 0.69
HDAC11Q96DB2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.39■□□□□ 0.69
HDAC11Q96DB2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC11Q96DB2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC11Q96DB2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms