Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 BX323043.1-201ENST00000641006 1765 ntBASIC19.96■□□□□ 0.79
UBA3Q8TBC4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 AC007663.1-201ENST00000438948 1240 ntBASIC19.96■□□□□ 0.79
UBA3Q8TBC4 CCR12P-201ENST00000446203 998 ntBASIC19.96■□□□□ 0.79
UBA3Q8TBC4 AP003041.3-201ENST00000527151 707 ntBASIC19.96■□□□□ 0.79
UBA3Q8TBC4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 AC116562.4-202ENST00000641738 218 ntBASIC19.96■□□□□ 0.79
UBA3Q8TBC4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBA3Q8TBC4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 AC092338.2-201ENST00000568827 1415 ntBASIC19.95■□□□□ 0.78
UBA3Q8TBC4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 TSPY17P-201ENST00000450329 467 ntBASIC19.95■□□□□ 0.78
UBA3Q8TBC4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
UBA3Q8TBC4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 GPAT2P1-201ENST00000444924 1672 ntBASIC19.94■□□□□ 0.78
UBA3Q8TBC4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 MIR4674-201ENST00000582457 87 ntBASIC19.94■□□□□ 0.78
UBA3Q8TBC4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.94■□□□□ 0.78
UBA3Q8TBC4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 KRT8P32-201ENST00000512863 1461 ntBASIC19.93■□□□□ 0.78
UBA3Q8TBC4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 RCC2P3-201ENST00000418112 1537 ntBASIC19.93■□□□□ 0.78
UBA3Q8TBC4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 AL023284.2-201ENST00000405850 579 ntBASIC19.93■□□□□ 0.78
UBA3Q8TBC4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 TNXA-203ENST00000507684 2038 ntBASIC19.93■□□□□ 0.78
UBA3Q8TBC4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms