Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 AC068587.7-201ENST00000641602 218 ntBASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SPTSSBQ8NFR3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 FLJ38576-201ENST00000623820 2459 ntBASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 AL512408.1-201ENST00000569378 2000 ntBASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 BID-203ENST00000399765 1879 ntTSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 FP700111.2-201ENST00000619190 1892 ntBASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC10.35□□□□□ -0.75
SPTSSBQ8NFR3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms