Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 AC012306.2-201ENST00000609350 630 ntBASIC19.34■□□□□ 0.69
RTL3Q8N8U3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 AC097493.4-201ENST00000641197 219 ntBASIC19.34■□□□□ 0.69
RTL3Q8N8U3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.34■□□□□ 0.69
RTL3Q8N8U3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTL3Q8N8U3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL3Q8N8U3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RTL3Q8N8U3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RTL3Q8N8U3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RTL3Q8N8U3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RTL3Q8N8U3 KRT18P22-201ENST00000402024 1347 ntBASIC19.33■□□□□ 0.69
RTL3Q8N8U3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL3Q8N8U3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTL3Q8N8U3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 ECEL1P2-202ENST00000465689 757 ntBASIC19.33■□□□□ 0.68
RTL3Q8N8U3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 FAM87A-204ENST00000613235 858 ntBASIC19.33■□□□□ 0.68
RTL3Q8N8U3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTL3Q8N8U3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 MCCD1P1-208ENST00000445732 328 ntBASIC19.32■□□□□ 0.68
RTL3Q8N8U3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.32■□□□□ 0.68
RTL3Q8N8U3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 AL109659.2-201ENST00000606809 1674 ntBASIC19.32■□□□□ 0.68
RTL3Q8N8U3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTL3Q8N8U3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.31■□□□□ 0.68
RTL3Q8N8U3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 AC211429.1-201ENST00000415277 523 ntBASIC19.3■□□□□ 0.68
RTL3Q8N8U3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 AC087289.5-201ENST00000586076 3175 ntBASIC19.3■□□□□ 0.68
RTL3Q8N8U3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 TNXA-203ENST00000507684 2038 ntBASIC19.3■□□□□ 0.68
RTL3Q8N8U3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.3■□□□□ 0.68
RTL3Q8N8U3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTL3Q8N8U3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL3Q8N8U3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RTL3Q8N8U3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms