Protein–RNA interactions for Protein: Q8N123

CPXCR1, CPX chromosomal region candidate gene 1 protein, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPXCR1Q8N123 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.64■■□□□ 1.06
CPXCR1Q8N123 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.64■■□□□ 1.06
CPXCR1Q8N123 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPXCR1Q8N123 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPXCR1Q8N123 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPXCR1Q8N123 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPXCR1Q8N123 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.64■■□□□ 1.05
CPXCR1Q8N123 HCG4P8-203ENST00000443049 980 ntBASIC21.64■■□□□ 1.05
CPXCR1Q8N123 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.64■■□□□ 1.05
CPXCR1Q8N123 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 AC008556.1-201ENST00000610908 2040 ntBASIC21.63■■□□□ 1.05
CPXCR1Q8N123 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 AL512353.2-201ENST00000448759 1962 ntBASIC21.63■■□□□ 1.05
CPXCR1Q8N123 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.63■■□□□ 1.05
CPXCR1Q8N123 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.63■■□□□ 1.05
CPXCR1Q8N123 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.63■■□□□ 1.05
CPXCR1Q8N123 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 SEC1P-202ENST00000473944 940 ntBASIC21.62■■□□□ 1.05
CPXCR1Q8N123 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.62■■□□□ 1.05
CPXCR1Q8N123 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 AC112497.1-201ENST00000624824 639 ntBASIC21.62■■□□□ 1.05
CPXCR1Q8N123 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 IRX1P1-201ENST00000438849 1838 ntBASIC21.62■■□□□ 1.05
CPXCR1Q8N123 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.62■■□□□ 1.05
CPXCR1Q8N123 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 FEM1AP3-201ENST00000403722 1741 ntBASIC21.61■■□□□ 1.05
CPXCR1Q8N123 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 KRT18P48-201ENST00000434763 852 ntBASIC21.61■■□□□ 1.05
CPXCR1Q8N123 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.61■■□□□ 1.05
CPXCR1Q8N123 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPXCR1Q8N123 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPXCR1Q8N123 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPXCR1Q8N123 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CPXCR1Q8N123 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPXCR1Q8N123 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPXCR1Q8N123 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPXCR1Q8N123 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms