Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
APLFQ8IW19 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APLFQ8IW19 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
APLFQ8IW19 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
APLFQ8IW19 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
APLFQ8IW19 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.68■□□□□ 0.58
APLFQ8IW19 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
APLFQ8IW19 HCG11-201ENST00000411553 5696 ntBASIC18.68■□□□□ 0.58
APLFQ8IW19 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.68■□□□□ 0.58
APLFQ8IW19 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
APLFQ8IW19 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.68■□□□□ 0.58
APLFQ8IW19 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.68■□□□□ 0.58
APLFQ8IW19 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.68■□□□□ 0.58
APLFQ8IW19 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.68■□□□□ 0.58
APLFQ8IW19 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
APLFQ8IW19 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
APLFQ8IW19 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
APLFQ8IW19 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.68■□□□□ 0.58
APLFQ8IW19 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APLFQ8IW19 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
APLFQ8IW19 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
APLFQ8IW19 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
APLFQ8IW19 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.67■□□□□ 0.58
APLFQ8IW19 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
APLFQ8IW19 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.67■□□□□ 0.58
APLFQ8IW19 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 AP003071.4-201ENST00000562276 1284 ntBASIC18.67■□□□□ 0.58
APLFQ8IW19 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
APLFQ8IW19 AF186192.3-201ENST00000583427 947 ntBASIC18.67■□□□□ 0.58
APLFQ8IW19 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 MIR2861-201ENST00000636310 90 ntBASIC18.67■□□□□ 0.58
APLFQ8IW19 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
APLFQ8IW19 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.67■□□□□ 0.58
APLFQ8IW19 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APLFQ8IW19 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.67■□□□□ 0.58
APLFQ8IW19 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.66■□□□□ 0.58
APLFQ8IW19 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.66■□□□□ 0.58
APLFQ8IW19 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
APLFQ8IW19 AC124067.4-201ENST00000519691 2379 ntBASIC18.66■□□□□ 0.58
APLFQ8IW19 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.66■□□□□ 0.58
APLFQ8IW19 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
APLFQ8IW19 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.66■□□□□ 0.58
APLFQ8IW19 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.66■□□□□ 0.58
APLFQ8IW19 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.66■□□□□ 0.58
APLFQ8IW19 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.66■□□□□ 0.58
APLFQ8IW19 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
APLFQ8IW19 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.66■□□□□ 0.58
APLFQ8IW19 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 AC009053.2-201ENST00000563701 2365 ntBASIC18.66■□□□□ 0.58
APLFQ8IW19 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
APLFQ8IW19 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
APLFQ8IW19 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
APLFQ8IW19 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
APLFQ8IW19 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.65■□□□□ 0.58
APLFQ8IW19 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
APLFQ8IW19 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms