Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LINC00346Q8IVM7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LINC00346Q8IVM7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 AC004980.1-204ENST00000429707 299 ntBASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00346Q8IVM7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 FAM201B-201ENST00000458407 597 ntBASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 AC005082.1-201ENST00000413042 2259 ntBASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 ANO7L1-203ENST00000602586 1720 ntBASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 KRT8P11-201ENST00000409686 1436 ntBASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 HTR7P1-202ENST00000624664 4411 ntBASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.69■□□□□ 0.26
LINC00346Q8IVM7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 TSPY20P-201ENST00000450910 630 ntBASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 FAM197Y4-202ENST00000622692 608 ntBASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00346Q8IVM7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms